Parental gene:

SSR3, ENSMMUG00000016970

Aliases:None
Description:translocon-associated protein subunit gamma [Source:RefSeq peptide;Acc:NP_001253473]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:131107650..131121407(+)


>ENSMMUG00000016970
ATGGCTCCCAAAGGCAGCTCCAAACAGCAGTCCGAGGAGGACCTGCTCCTGCAGGATTTCAGCCGCAATCTCTCGGCCAA
GTCCTCCGCGCTCTTCTTCGGGAACGCGTTCATCGTGTCCGCCATCCCCATCTGGTTATACTGGAGAATATGGCATATGG
ATCTTATTCAGTCTGCTGTTTTGTATAGTGTGATGACCCTAGTAAGCACATATTTGGTAGCCTTTGCATACAAGAATGTG
AAATTTGTTCTCAAGCACAAAGTAGCGCAGAAGAGGGAGGATGCTGTTTCCAAAGAAGTGACTCGAAAACTTTCTGAAGC
TGATAATAGAAAGATGTCTCGGAAGGAGAAAGATGAAAGAATCTTGTGGAAGAAGAATGAAGTTGCTGATTATGAAGCTA
CAACATTTTCCATCTTCTATAACAACACTCTGTTCCTGGTCGTGGTCATTGTTGCTTCCTTCTTCATATTGAAGAACTTC
AACCCTACAGTGAACTACATCTTGTCCATAAGTGCTTCATCAGGACTCATCGCCCTCCTGTCTACTGGCTCCAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 28 .80 RPM
SRP007412_brain 31 .93 RPM
SRP007412_cerebellum 36 .42 RPM
SRP007412_heart 52 .58 RPM
SRP007412_kidney 86 .62 RPM
SRP007412_liver 62 .11 RPM
SRP007412_testis 34 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003125 ortholog_one2one 1 retrogene
retro_amel_832,
Canis familiaris ENSCAFG00000008870 ortholog_one2one 5 retrogenes
retro_cfam_1296, retro_cfam_1370, retro_cfam_1924, retro_cfam_2029, retro_cfam_2041,
Choloepus hoffmanni ENSCHOG00000001517 ortholog_one2many 1 retrogene
retro_chof_29,
Callithrix jacchus ENSCJAG00000004643 ortholog_one2one 4 retrogenes
retro_cjac_1059, retro_cjac_1503, retro_cjac_2369, retro_cjac_3213,
Cavia porcellus ENSCPOG00000005898 ortholog_one2one 2 retrogenes
retro_cpor_1243, retro_cpor_826,
Dasypus novemcinctus ENSDNOG00000000752 ortholog_one2one 2 retrogenes
retro_dnov_1922, retro_dnov_632,
Homo sapiens ENSG00000114850 ortholog_one2one 1 retrogene
retro_hsap_173,
Gorilla gorilla ENSGGOG00000024038 ortholog_one2one 1 retrogene
retro_ggor_255,
Myotis lucifugus ENSMLUG00000015478 ortholog_one2one 3 retrogenes
retro_mluc_1624, retro_mluc_1728, retro_mluc_2146,
Otolemur garnettii ENSOGAG00000010589 ortholog_one2one 2 retrogenes
retro_ogar_2089, retro_ogar_3483,
Pongo abelii ENSPPYG00000014233 ortholog_one2one 1 retrogene
retro_pabe_456,
Pan troglodytes ENSPTRG00000015560 ortholog_one2one 1 retrogene
retro_ptro_163,
Tarsius syrichta ENSTSYG00000010578 ortholog_one2one 1 retrogene
retro_tsyr_660,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_383 85.03 100.00
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Download FASTA sequences of all ENSMMUG00000016970 retrocopies