Parental gene:

PPA2, ENSMMUG00000017004

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:5:98443227..98533015(-)


>ENSMMUG00000017004
ATGAGCGCGCTGCTGCGGCTGCTGCGCACGGGTGCCCCCGCCGCTGCGTGCCTGCGGTTGGGGACCAGTGCTGGGACCGG
GCCGCGCCGTGCTATGGCCCTGTACCACACCGAGGAGCGCGGCCAGCCCTGCTCGCAGAATTATCGCCTCTTCTTCAAGG
ATGTAACTGGTCACTACATTTCCCCCTTTCATGATATTCCTCTGAAGGTGAACTCTAAAGAGGACATTGAGGCTCAAGGC
ATTTTTATTGACTTGTCTAGATCTGTTGAAAATGGCATTCCTACGAAGAAAGCACGAAATGATGAATATGAGAATCTGTT
TAATATGATTGTAGAAATACCTCGGTGGACAAATGCTAAAATGGAGATTGCCACCGAAGAGCCACTGAATCCCATTAAAC
AATATGTAAAGGATGGAAAGCTACGCTATGTGGCGAATATCTTCCCTTACAAGGGTTATATATGGAATTATGGTACCCTC
CCTCAGACTTGGGAAGATCCCGGTGAAAAAGATAAGAGCACGAACTGCTTTGGAGATAATGATCCTATTGATGTTTGTGA
AATAGGCTCAAAGATTCTTTCTTGTGGAGAAGTTATTCATGTGAAGATTCTCGGAATTTTGGCTCTTATTGATGAAGGTG
AAACAGATTGGAAATTAATTGCTATCAATGTGAATGATCCTGAAGCCTCAAAGTTTCATGATATTGATGATGTTGAGAAG
TTCAAACCAGGTTACCTAGAAGCTACTCTTAATTGGTTTAGATTATATAAGGTACCAGATGGAAAACCAGAAAACCAGTT
TGCTTTTAATGGAGAATTCAAAAACAAGGCTTTTGCTCTTGAAGTTATTAAATCCACTCATCAATGTTGGAAAGCATTGC
TTATGAAGAAGTGTAATGGAGGAGCTATAAATTGCACAAACGTGCAGATATCTGATAGCCCTTTCCGTTGCACTCAAGAG
GAAGCAAGATCATTAGTTGAATCGGTA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .30 RPM
SRP007412_brain 11 .88 RPM
SRP007412_cerebellum 12 .59 RPM
SRP007412_heart 14 .66 RPM
SRP007412_kidney 14 .44 RPM
SRP007412_liver 11 .68 RPM
SRP007412_testis 13 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010887 ortholog_one2one 1 retrogene
retro_cfam_405,
Choloepus hoffmanni ENSCHOG00000008731 ortholog_one2one 3 retrogenes
retro_chof_1052, retro_chof_430, retro_chof_769,
Echinops telfairi ENSETEG00000014816 ortholog_one2one 1 retrogene
retro_etel_1959,
Macaca mulatta ENSMMUG00000006397 within_species_paralog 1 retrogene
retro_mmul_1540,
Monodelphis domestica ENSMODG00000020635 ortholog_one2one 5 retrogenes
retro_mdom_638, retro_mdom_795, retro_mdom_945, retro_mdom_946, retro_mdom_947,
Oryctolagus cuniculus ENSOCUG00000005941 ortholog_one2many 2 retrogenes
retro_ocun_1338, retro_ocun_1470,
Ochotona princeps ENSOPRG00000007086 ortholog_one2one 1 retrogene
retro_opri_847,
Sus scrofa ENSSSCG00000022365 ortholog_one2one 1 retrogene
retro_sscr_557,
Tursiops truncatus ENSTTRG00000003141 ortholog_one2one 2 retrogenes
retro_ttru_1307, retro_ttru_606,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1278 89.39 63.06
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Download FASTA sequences of all ENSMMUG00000017004 retrocopies