Parental gene: | ENSOCUG00000005941 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 15:44161097..44267983(+) |
>ENSOCUG00000005941
ATGCGCGCGCTGCTGGCGCTGCTGCGCACGGGCCGGGGGTGGCGCGCGGGCAGCCCCGTCGCCGCCCACCCGCCGGCGGG
AGCGAGGGCAAGGAGCGGGCCGCTGCGCGCCATGGCCCTGTACCACACGGAGGAGCGCGGCCGGCCCCACTCGGAGGACT
ACCGCCTCTTCTTCAAGAATGTAGCTGGCCACTACATTTCTCCCTTTCATGATATTCCTCTGAAAGTGGAGTCTAAAGAG
GAAAATGGCATTCCTACAAAGAAAGCACGAAATGATGAATATGAGAATTTGTTTAACATGGTTGTAGAAGTACCTCGGTG
GACAAATGCTAAAATGGAGATTGCCACCAAGGAGCCATTGAATCCCATTAAACAAGATGTAAAGCATGGCAAGCTGCGCT
ATGTGGCAAATATCTTCCCTCACAAGGGTTATATATGGAATTATGGTGCTCTCCCTCAGACTTGGGAAGATCCCCATCAA
ACAGATGAGAGCACAAACTGCTGTGGAGATAATGATCCTATTGATGTTTGTGAAATAGGCTCAAAGGTTCTTACTCGTGG
AGAGGTTGTTCATGTGAAGATTCTTGGAATTTTGGCTCTGATTGATGAGGGTGAAACGGATTGGAAATTAATTGCTATCA
ATGCTAATGATCCTGAAGCCTCAAAGTTTGATGATATTGATGATGTTAAGAAGTTCAAACCTGGATACCTGGAAGCTACT
CTTAACTGGTTTAAGTTTTATAAAGTACCAGATGGAAAACCAGAAAACCAGTTTGCTTTTAATGGAGAATTCAGAAACAA
GGCTTTTGCTCTTGAAGTTATTAAGTCTACTCATGATCACTGGAAGGCATTGCTCATGAAGAAATGTGATGGAGGGGCAA
TAAATTGCACAAACGTGCAGGTGTGTGATAGCCCTTTCCTTTGCACTCAAGAGGAAGCAAGATCATTCGTTGAATCGAAA
TTGTCATCTTCACAGAACAATGAAAATGATGAAGAAGAGCAAATATGGCACTTCCTTGGCAAGTGA
ATGCGCGCGCTGCTGGCGCTGCTGCGCACGGGCCGGGGGTGGCGCGCGGGCAGCCCCGTCGCCGCCCACCCGCCGGCGGG
AGCGAGGGCAAGGAGCGGGCCGCTGCGCGCCATGGCCCTGTACCACACGGAGGAGCGCGGCCGGCCCCACTCGGAGGACT
ACCGCCTCTTCTTCAAGAATGTAGCTGGCCACTACATTTCTCCCTTTCATGATATTCCTCTGAAAGTGGAGTCTAAAGAG
GAAAATGGCATTCCTACAAAGAAAGCACGAAATGATGAATATGAGAATTTGTTTAACATGGTTGTAGAAGTACCTCGGTG
GACAAATGCTAAAATGGAGATTGCCACCAAGGAGCCATTGAATCCCATTAAACAAGATGTAAAGCATGGCAAGCTGCGCT
ATGTGGCAAATATCTTCCCTCACAAGGGTTATATATGGAATTATGGTGCTCTCCCTCAGACTTGGGAAGATCCCCATCAA
ACAGATGAGAGCACAAACTGCTGTGGAGATAATGATCCTATTGATGTTTGTGAAATAGGCTCAAAGGTTCTTACTCGTGG
AGAGGTTGTTCATGTGAAGATTCTTGGAATTTTGGCTCTGATTGATGAGGGTGAAACGGATTGGAAATTAATTGCTATCA
ATGCTAATGATCCTGAAGCCTCAAAGTTTGATGATATTGATGATGTTAAGAAGTTCAAACCTGGATACCTGGAAGCTACT
CTTAACTGGTTTAAGTTTTATAAAGTACCAGATGGAAAACCAGAAAACCAGTTTGCTTTTAATGGAGAATTCAGAAACAA
GGCTTTTGCTCTTGAAGTTATTAAGTCTACTCATGATCACTGGAAGGCATTGCTCATGAAGAAATGTGATGGAGGGGCAA
TAAATTGCACAAACGTGCAGGTGTGTGATAGCCCTTTCCTTTGCACTCAAGAGGAAGCAAGATCATTCGTTGAATCGAAA
TTGTCATCTTCACAGAACAATGAAAATGATGAAGAAGAGCAAATATGGCACTTCCTTGGCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .86 RPM |
| SRP017611_kidney | 50 .68 RPM |
| SRP017611_brain | 19 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010887 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008731 | ortholog_one2many | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000014816 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017004 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000020635 | ortholog_one2many | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016001 | within_species_paralog | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000007086 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022365 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003141 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1338 | 71.13 | 82.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1470 | 67.06 | 73.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000005941 retrocopies