Parental gene: | POLE3, ENSMODG00000004358 |
| Aliases: | None |
| Description: | polymerase (DNA directed), epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:13546] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:452651624..452655279(+) |
>ENSMODG00000004358
ATGGCGGAAAGACCCGAGGACTTGAACCTTCCCAACGCCGTCATCACCAGGATCATCAAGGAGGCGCTCCCCGACGGCGT
CAATATCTCTAAAGAGGCACGAAGTGCCATCTCCCGGGCTGCCAGCGTGTTCGTGCTGTACGCCACATCTTGTGCAAACA
ACTTTGCAATGAAAGGAAAGCGGAAGACCCTAAATGCTGGTGATGTACTGTCGGCCATGGAAGAGATGGAATTTCAGCGA
TTCATTTCTCCTTTGAAAGAAGCACTAGATGCATATAGACGTGAACAGAAAGGTAAAAAGGAAGCTTCAGAGCAAAAGAA
GAAAGATAAAGACAAAAGGATAGATTCTGAAGAGCAAGACAAGAGCAGGGAAGATGATAATGATGAGGATGATGAAAGGA
TGGAAGAGGAGGAACAGAATGATGAAGAAGTTGACAATTGA
ATGGCGGAAAGACCCGAGGACTTGAACCTTCCCAACGCCGTCATCACCAGGATCATCAAGGAGGCGCTCCCCGACGGCGT
CAATATCTCTAAAGAGGCACGAAGTGCCATCTCCCGGGCTGCCAGCGTGTTCGTGCTGTACGCCACATCTTGTGCAAACA
ACTTTGCAATGAAAGGAAAGCGGAAGACCCTAAATGCTGGTGATGTACTGTCGGCCATGGAAGAGATGGAATTTCAGCGA
TTCATTTCTCCTTTGAAAGAAGCACTAGATGCATATAGACGTGAACAGAAAGGTAAAAAGGAAGCTTCAGAGCAAAAGAA
GAAAGATAAAGACAAAAGGATAGATTCTGAAGAGCAAGACAAGAGCAGGGAAGATGATAATGATGAGGATGATGAAAGGA
TGGAAGAGGAGGAACAGAATGATGAAGAAGTTGACAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 107 .16 RPM |
| SRP007412_cerebellum | 49 .29 RPM |
| SRP007412_heart | 18 .34 RPM |
| SRP007412_kidney | 71 .11 RPM |
| SRP007412_liver | 31 .22 RPM |
| SRP007412_testis | 344 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017917 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000000313 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000003073 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000028394 | ortholog_one2many | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000004717 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000015392 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027365 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005211 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_647 | 62.16 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1680 | 52.59 | 77.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1920 | 57.14 | 57.53 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000004358 retrocopies