Parental gene:

SC5D, ENSMODG00000013028

Aliases:None
Description:sterol-C5-desaturase [Source:HGNC Symbol;Acc:10547]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:227383416..227407460(-)


>ENSMODG00000013028
ATGGATCTTGTACTGAATGTTGCAGATTATTATTTTTTCACACCATATGTATATCCAAGTACGTGGCCAGAGGACGAAAT
CATCCGACAATCTCTCAGCCTCCTAGTTGTAACAAATCTTGGTGCTTACATTTTATATTTCCTTTTTGCAACTCTGAGCT
ATTATTTTATCTTTGATCACTCATTAAAGAAACATCCACTATTTTTAGAGAACCAAGTATATCGAGAGATTATGTGTACT
GTCAAGGCACTACCTTGGATAAGTATTCCCACAGTTGCAATTTTTCTGGCAGAGATCAGAGGTTACAGCAAACTGTATGA
CCGCATAGAAGATTCACCATATGGTTGGCTTGGAGTCATTCTTAGTATGGCATCCTTCCTCTTCTTCACTGATATGTCGA
TCTACTGGATTCATCGGGGCCTTCACCATAAACTTGTATATAAGCGTCTACACAAGCCTCATCATGTTTGGAAGATTACT
ACTCCATTTGCAAGTCATGCTTTCCACCCAATGGATGGCTTCCTTCAGGGAGTACCATATCATATATATCCTTTCTTCTT
TCCATTACACAAAGTGGTTTATTTAGCCCTCTACATCATTGTGAATCTCTGGACAATTTCCATTCATGATGGTTACTACC
AAGTTCCAAAAATCTTAGAACCATTTATTAATGGTGCAGCCCATCACACAGATCACCACCTCTTTTTTGATTATAACTAT
GGCCAATATTTCACACTGTGGGATAGAATTGGAGGATCTTTCAAGTATCCTTCTGCTCTTAAAGGCACTGGACCAATGCA
TTATATAAAGAAAGTAGTTGGAAAAAATGTAAATGGCCATGCAAGAAATGGTTGCCAGAATGAAGAGTTATTCAATGGAG
AGAATTTAAAGACTAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019246 ortholog_one2one 1 retrogene
retro_btau_813,
Canis familiaris ENSCAFG00000011805 ortholog_one2one 1 retrogene
retro_cfam_291,
Callithrix jacchus ENSCJAG00000007436 ortholog_one2one 1 retrogene
retro_cjac_1911,
Mustela putorius furo ENSMPUG00000005754 ortholog_one2one 1 retrogene
retro_mputfur_484,
Ochotona princeps ENSOPRG00000003219 ortholog_one2one 1 retrogene
retro_opri_1143,
Ictidomys tridecemlineatus ENSSTOG00000008946 ortholog_one2one 1 retrogene
retro_itri_964,
Tupaia belangeri ENSTBEG00000000490 ortholog_one2one 1 retrogene
retro_tbel_4326,
Tarsius syrichta ENSTSYG00000011139 ortholog_one2one 1 retrogene
retro_tsyr_1097,
Tursiops truncatus ENSTTRG00000006908 ortholog_one2one 1 retrogene
retro_ttru_777,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1086 54.14 51.84
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Download FASTA sequences of all ENSMODG00000013028 retrocopies