Parental gene: | SRP19, ENSMODG00000013278 |
| Aliases: | None |
| Description: | signal recognition particle 19kDa [Source:HGNC Symbol;Acc:11300] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 6:501586..508054(-) |
>ENSMODG00000013278
ATGGCGTACGCAGATCGGTCTCCGGCGGACAAGGACAGGTTCATCTGCATCTATCCTGCATATCTAAACAACAAGAAGAC
CATCGCGGAGGGCCGACGGATTCCGATGGACAAAGCTGTTGAGAATCCTACAGCTACGGAAATCCAAGACGTGTGCCTGG
CCGTGGGACTGAATGTGCACGTTGAGAAAAATAAGATGTACTCCAGAGAGTGGAACCGTGACCTCCAGTATCGGGGCAGA
GTGCGGGTTCAGCTGAAGCAGGAGGACGGCAGCCTCTGCCTCGTCCAGTTCCCGTCCCGAAAGTCAGTCATGTTGTACGC
GGCCGAAATGATTCCTAAGCTCAAAACAAGGACACAAAAAACAGGAGGCGGTGATCAAAGTCTCCAACAAGGAGAGGGAG
GCAAAAAGGGAAAAGGGAAGAAGAAGAAGTGA
ATGGCGTACGCAGATCGGTCTCCGGCGGACAAGGACAGGTTCATCTGCATCTATCCTGCATATCTAAACAACAAGAAGAC
CATCGCGGAGGGCCGACGGATTCCGATGGACAAAGCTGTTGAGAATCCTACAGCTACGGAAATCCAAGACGTGTGCCTGG
CCGTGGGACTGAATGTGCACGTTGAGAAAAATAAGATGTACTCCAGAGAGTGGAACCGTGACCTCCAGTATCGGGGCAGA
GTGCGGGTTCAGCTGAAGCAGGAGGACGGCAGCCTCTGCCTCGTCCAGTTCCCGTCCCGAAAGTCAGTCATGTTGTACGC
GGCCGAAATGATTCCTAAGCTCAAAACAAGGACACAAAAAACAGGAGGCGGTGATCAAAGTCTCCAACAAGGAGAGGGAG
GCAAAAAGGGAAAAGGGAAGAAGAAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000031549 | ortholog_one2one | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000013452 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016512 | ortholog_one2one | 4 retrogenes | |
| Equus caballus | ENSECAG00000008895 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000007298 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000017132 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000025895 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000153037 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012529 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000000399 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000014793 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000331 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000012695 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000014504 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011571 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015639 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008579 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000010549 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000029584 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000004895 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020204 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000348 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_663 | 94.74 | 93.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1366 | 75.52 | 98.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1880 | 80.95 | 58.74 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000013278 retrocopies