Parental gene:

ENSMODG00000017091

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:37005918..37019364(-)


>ENSMODG00000017091
ATGGAAGACTACACGAAAATAGAAAAAATTGGGGAAGGTACCTATGGTGTTGTATATAAGGGTCGACATAAAACTACAGG
CCAGGTGGTAGCCATGAAGAAAATCAGATTAGAGAGTGAAGAAGAGGGTGTTCCAAGTACTGCAATTCGAGAAATTTCTC
TGTTGAAAGAACTTCGTCATCCGAACATTGTCAGCCTTCAAGATGTGCTCATGCAAGATGCTAGACTATACCTCATTTTT
GAATTCCTTTCCATGGATCTCAAGAAGTATTTGGATTCTATCCCTCCTGGCCAGTATATGGATTCTTCCCTTGTTAAAGT
AAGGCTATTCCTACTAAGTTATTTGTACCAAATATTACAAGGCATTGTCTTTTGTCACTCACGAAGAGTTCTTCACAGAG
ATTTGAAGCCTCAAAATTTGTTAATAGATGATAAAGGTGTAATTAAGCTAGCCGACTTTGGACTTGCACGGGCCTTTGGA
ATACCTATAAGGGTATATACACATGAGGTGGTGACGCTGTGGTACCGGTCTCCGGAGGTGCTGCTCGGCTCGGCCAGGTA
CTCCACCCCGGTGGACATCTGGAGCATCGGCACCATCTTCGCCGAACTGGCCACCAAGAAGCCGCTGTTCCACGGAGACT
CCGAGATCGACCAGCTCTTCCGCATCTTCAGGGCTTTGGGGACTCCGAATAACGAAGTGTGGCCGGAAGTGGAGTCGCTG
CAGGATTACAAGAATACGTTCCCTAAGTGGAAGCCAGGCAGTCTGACGTCGCACGTCAAGAACCTGGATGAAAACGGCAT
CGACCTGCTCTCTAAAATGTTGGTCTATGATCCTGCCAAGCGAATTTCTGGCAAAATGGCATTGAACCATCCATATTTTA
ATGACCTGGACAGTCAGATTAAGAAGCTCTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .95 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .40 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 1 .51 RPM
SRP007412_testis 20 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007001 ortholog_one2many 2 retrogenes
retro_cjac_1846, retro_cjac_671,
Cavia porcellus ENSCPOG00000005402 ortholog_one2many 3 retrogenes
retro_cpor_1414, retro_cpor_1422, retro_cpor_200,
Dasypus novemcinctus ENSDNOG00000018590 ortholog_one2many 1 retrogene
retro_dnov_265,
Equus caballus ENSECAG00000009716 ortholog_one2many 1 retrogene
retro_ecab_637,
Felis catus ENSFCAG00000014972 ortholog_one2many 1 retrogene
retro_fcat_329,
Microcebus murinus ENSMICG00000005793 ortholog_many2many 1 retrogene
retro_mmur_43,
Monodelphis domestica ENSMODG00000007835 within_species_paralog 1 retrogene
retro_mdom_32,
Rattus norvegicus ENSRNOG00000000632 ortholog_one2many 1 retrogene
retro_rnor_1638,
Tupaia belangeri ENSTBEG00000017549 ortholog_one2many 3 retrogenes
retro_tbel_3309, retro_tbel_807, retro_tbel_812,
Tursiops truncatus ENSTTRG00000001085 ortholog_one2many 2 retrogenes
retro_ttru_1619, retro_ttru_1634,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_702 69.78 59.08
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Download FASTA sequences of all ENSMODG00000017091 retrocopies