Parental gene: | Snrpb, ENSMUSG00000027404 |
| Aliases: | Snrpb, AL024368, AU018828, SM-B, SM11, SMB, SNRNP-B |
| Description: | small nuclear ribonucleoprotein B [Source:MGI Symbol;Acc:MGI:98342] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:130171413..130179403(-) |
>ENSMUSG00000027404
ATGACGGTGGGCAAGAGCAGCAAGATGCTGCAGCACATTGACTACAGGATGAGGTGCATCCTGCAGGACGGCCGCATCTT
CATCGGGACCTTCAAAGCCTTTGACAAGCACATGAACTTGATCCTGTGTGACTGTGATGAGTTCAGGAAGATCAAGCCAA
AGAACTCCAAACAAGCAGAAAGGGAAGAGAAGCGAGTCCTTGGTCTGGTGTTGCTTCGAGGGGAGAACCTGGTCTCCATG
ACAGTAGAAGGACCTCCTCCCAAAGATACTGGCATTGCCCGAGTGCCACTTGCTGGAGCTGCTGGGGGGCCAGGCATCGG
CAGGGCTGCTGGCAGAGGAATCCCGGCTGGTGTTCCTATGCCCCAGGCTCCTGCAGGACTTGCTGGGCCAGTCCGAGGTG
TTGGAGGGCCATCCCAACAGGTGATGACCCCACAAGGAAGAGGCACTGTTGCAGCTGCTGCCGCTGCAGCCACAGCCAGT
ATTGCAGGAGCCCCAACTCAGTACCCACCTGGTCGTGGGGGTCCTCCTCCACCTATGGGCCGAGGAGCCCCTCCTCCAGG
TATGATGGGCCCACCTCCTGGCATGCGGCCTCCCATGGGTCCCCCAATGGGGCTCCCTCCTGGCCGAGGAACTCCAATGG
GCATGCCCCCTCCTGGCATGCGGCCTCCTCCTCCAGGCATGCGAGGTCTGCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 36 .68 RPM |
| SRP007412_cerebellum | 37 .69 RPM |
| SRP007412_heart | 45 .67 RPM |
| SRP007412_kidney | 41 .52 RPM |
| SRP007412_liver | 24 .74 RPM |
| SRP007412_testis | 32 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000006693 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020971 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000000948 | within_species_paralog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016149 | possible_ortholog | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006961 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_554 | 71.43 | 65.37 | Please wait, loading  |
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| 2. | retro_mmus_2938 | 68.94 | 98.70 | Please wait, loading |
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| 3. | retro_mmus_3450 | 78.26 | 58.87 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000027404 retrocopies