Parental gene: | SNRPB, ENSOGAG00000016149 |
| Aliases: | None |
| Description: | small nuclear ribonucleoprotein polypeptides B and B1 [Source:HGNC Symbol;Acc:11153] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873544.1:12958331..12966423(+) |
>ENSOGAG00000016149
ATGACTGTGGGCAAGAGCAGCAAAATGCTGCAGCATATTGACTACAGGATGAGATGCATCCTGCAAGATGGCCGGATCTT
CATCGGCACCTTCAAGGCTTTCGACAAGCATATGAATTTGATCCTTTGTGACTGTGATGAGTTCAGAAAAATCAAGCCTA
AGAACTCCAAACAAGCAGAGAGGGAAGAGAAGCGAGTCCTTGGCCTGGTGCTGCTACGAGGGGAGAACCTGGTCTCAATG
ACAGTAGAGGGACCACCTCCTAAAGATACTGGTATTGCCCGAGTGCCACTTGCTGGAGCTGCTGGAGGTCCAGGGATTGG
CAGGGCTGCTGGCCGAGGAATCCCAGCTGGGGTTCCCATGCCCCAGGCTCCTGCAGGACTTGCTGGTCCAGTCCGTGGGG
TTGGTGGGCCATCCCAGCAGGTGATGACCCCACAAGGAAGAGGTACTGTGGCTGCTGCTGCAGCTGCTGCCACAGCTAGT
ATTGCAGGGGCCCCAACCCAGTACCCCCCTGGCCGTGGGGGTCCTCCCCCACCTATGGGCCGAGGGGCACCCCCTCCAGG
CATGATGGGCCCACCTCCTGGCATGAGGCCTCCCATGGGTCCCCCAATGGGAATTCCCCCTGGACGAGGGACTCCGATGG
GCATGCCCCCTCCAGGGATGCGGCCTCCTCCCCCAGGGATGCGAGGGCCCCCTCCCCCGGGAATGCGCCCACCAAGGCCC
TAG
ATGACTGTGGGCAAGAGCAGCAAAATGCTGCAGCATATTGACTACAGGATGAGATGCATCCTGCAAGATGGCCGGATCTT
CATCGGCACCTTCAAGGCTTTCGACAAGCATATGAATTTGATCCTTTGTGACTGTGATGAGTTCAGAAAAATCAAGCCTA
AGAACTCCAAACAAGCAGAGAGGGAAGAGAAGCGAGTCCTTGGCCTGGTGCTGCTACGAGGGGAGAACCTGGTCTCAATG
ACAGTAGAGGGACCACCTCCTAAAGATACTGGTATTGCCCGAGTGCCACTTGCTGGAGCTGCTGGAGGTCCAGGGATTGG
CAGGGCTGCTGGCCGAGGAATCCCAGCTGGGGTTCCCATGCCCCAGGCTCCTGCAGGACTTGCTGGTCCAGTCCGTGGGG
TTGGTGGGCCATCCCAGCAGGTGATGACCCCACAAGGAAGAGGTACTGTGGCTGCTGCTGCAGCTGCTGCCACAGCTAGT
ATTGCAGGGGCCCCAACCCAGTACCCCCCTGGCCGTGGGGGTCCTCCCCCACCTATGGGCCGAGGGGCACCCCCTCCAGG
CATGATGGGCCCACCTCCTGGCATGAGGCCTCCCATGGGTCCCCCAATGGGAATTCCCCCTGGACGAGGGACTCCGATGG
GCATGCCCCCTCCAGGGATGCGGCCTCCTCCCCCAGGGATGCGAGGGCCCCCTCCCCCGGGAATGCGCCCACCAAGGCCC
TAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011353 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000006693 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020971 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000007896 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000015568 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000014447 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000016519 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016951 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009283 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027404 | possible_ortholog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009206 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007392 | within_species_paralog | 5 retrogenes | |
| Ochotona princeps | ENSOPRG00000007459 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000010841 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017013 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000006961 | possible_ortholog | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000010040 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000014498 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_2197 | 63.89 | 87.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_2841 | 93.07 | 95.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_2918 | 72.03 | 93.75 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_3236 | 76.02 | 80.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000016149 retrocopies