Parental gene:

Nenf, ENSMUSG00000037499

Aliases:Nenf, 1110060M21Rik, SCIRP10, Spuf
Description:neuron derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:1913458]
Organism:Mouse (Mus musculus)
Coordinates:1:191306788..191318194(-)


>ENSMUSG00000037499
ATGGCGCGCCCCGCGCCCTGGTGGCGGCTGCGGCTGCTGGCGGCGCTCGTCCTGGCGCTGGCTCTGGTCCCAGTGCCCTC
AGCCTGGGCTGGGCAGACGCCGCGCCCCGCAGAGCGCGGGCCCCCGGTGCGGCTCTTCACCGAGGAGGAGCTGGCCCGCT
ACGGCGGCGAGGAGGAGGATCAGCCCATCTACTTGGCAGTGAAGGGAGTGGTGTTCGATGTCACCTCTGGGAAGGAGTTT
TATGGACGAGGAGCCCCCTACAATGCCTTGGCCGGGAAGGACTCCAGCAGAGGTGTGGCCAAGATGTCACTGGATCCAGC
AGACCTCACTCACGACACTACTGGTCTCACGGCCAAGGAGCTGGAGGCCCTCGATGACGTCTTCAGCAAGGTGTACAAAG
CCAAGTACCCCATTGTTGGCTACACAGCCCGAAGGATCCTCAACGAGGATGGCAGCCCCAACCTGGACTTCAAGCCTGAA
GACCAGCCCCATTTTGACATAAAGGACGAATTCTGA

Library Parental gene expression (RPM)
SRP007412_brain 26 .45 RPM
SRP007412_cerebellum 33 .00 RPM
SRP007412_heart 49 .34 RPM
SRP007412_kidney 28 .34 RPM
SRP007412_liver 7 .29 RPM
SRP007412_testis 7 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001341 ortholog_one2one 1 retrogene
retro_amel_836,
Bos taurus ENSBTAG00000000759 ortholog_one2one 1 retrogene
retro_btau_1238,
Dasypus novemcinctus ENSDNOG00000003399 ortholog_one2one 1 retrogene
retro_dnov_1256,
Felis catus ENSFCAG00000031796 ortholog_one2one 1 retrogene
retro_fcat_1171,
Homo sapiens ENSG00000117691 ortholog_one2one 2 retrogenes
retro_hsap_3288, retro_hsap_379,
Gorilla gorilla ENSGGOG00000025197 ortholog_one2one 1 retrogene
retro_ggor_830,
Macaca mulatta ENSMMUG00000002142 ortholog_one2one 2 retrogenes
retro_mmul_2064, retro_mmul_490,
Nomascus leucogenys ENSNLEG00000002893 ortholog_one2one 1 retrogene
retro_nleu_1354,
Ochotona princeps ENSOPRG00000014204 ortholog_one2one 2 retrogenes
retro_opri_127, retro_opri_775,
Pongo abelii ENSPPYG00000000236 ortholog_one2one 2 retrogenes
retro_pabe_2717, retro_pabe_328,
Pan troglodytes ENSPTRG00000001961 ortholog_one2one 2 retrogenes
retro_ptro_2224, retro_ptro_295,
Sus scrofa ENSSSCG00000015597 ortholog_one2one 1 retrogene
retro_sscr_393,
Ictidomys tridecemlineatus ENSSTOG00000022293 ortholog_one2one 2 retrogenes
retro_itri_1876, retro_itri_340,
Tarsius syrichta ENSTSYG00000001880 ortholog_one2one 3 retrogenes
retro_tsyr_1189, retro_tsyr_411, retro_tsyr_549,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3309 61.40 66.08
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Download FASTA sequences of all ENSMUSG00000037499 retrocopies