Parental gene:

NENF, ENSPPYG00000000236

Aliases:None
Description:neudesin neurotrophic factor [Source:HGNC Symbol;Acc:30384]
Organism:Orangutan (Pongo abelii)
Coordinates:1:37525353..37541730(-)


>ENSPPYG00000000236
ATGGCGGGCCCCGCGCCGCAGCGGCAGCTGCGGCCGCTGGCAGCGCTGGCCCTGGTCCTGGCGCTGGCCCCGGGGCTGCC
GACAACCCGGGCCGGGCAGACGCCGCGCCCTGCCGAGCGGGGGCCCCCAGTGCGGCTTTTCACTGAGGAGGAGCTGGCCC
GCTATGGCGGGGAGGAGGAAGATCAGCCCATCTACTTGGCAGTGAAGGGAGTGGTGTTTGATGTCACCTCCGGAAAGGAG
TTTTATGGACGAGGAGCCCCCTACAATGCCTTGACGGGGAAGGACTCCACTAGAGGGGTAGCCAAGATGTCCTTGGATCC
TGCAGACCTCACCCATGACACTACGGGTCTCACGGCCAAGGAACTGGAGGCCCTGGATGAGGTCTTCACCAAAGTGTACA
AAGCCAAATACCCCATCGTCGGCTACACGGCCCGGAGAATTCTCAATGAGGATGGCAGCCCTAACCTGGACTTCAAGCCT
GAAGACCAGCCCCATTTTGACATCAAGGACGAGTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .96 RPM
SRP007412_cerebellum 10 .21 RPM
SRP007412_heart 11 .23 RPM
SRP007412_kidney 23 .37 RPM
SRP007412_liver 11 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001341 ortholog_one2one 1 retrogene
retro_amel_836,
Bos taurus ENSBTAG00000000759 ortholog_one2one 1 retrogene
retro_btau_1238,
Dasypus novemcinctus ENSDNOG00000003399 ortholog_one2one 1 retrogene
retro_dnov_1256,
Felis catus ENSFCAG00000031796 ortholog_one2one 1 retrogene
retro_fcat_1171,
Homo sapiens ENSG00000117691 ortholog_one2one 2 retrogenes
retro_hsap_3288, retro_hsap_379,
Gorilla gorilla ENSGGOG00000025197 ortholog_one2one 1 retrogene
retro_ggor_830,
Macaca mulatta ENSMMUG00000002142 ortholog_one2one 2 retrogenes
retro_mmul_2064, retro_mmul_490,
Mus musculus ENSMUSG00000037499 ortholog_one2one 1 retrogene
retro_mmus_3309,
Nomascus leucogenys ENSNLEG00000002893 ortholog_one2one 1 retrogene
retro_nleu_1354,
Ochotona princeps ENSOPRG00000014204 ortholog_one2one 2 retrogenes
retro_opri_127, retro_opri_775,
Pan troglodytes ENSPTRG00000001961 ortholog_one2one 2 retrogenes
retro_ptro_2224, retro_ptro_295,
Sus scrofa ENSSSCG00000015597 ortholog_one2one 1 retrogene
retro_sscr_393,
Ictidomys tridecemlineatus ENSSTOG00000022293 ortholog_one2one 2 retrogenes
retro_itri_1876, retro_itri_340,
Tarsius syrichta ENSTSYG00000001880 ortholog_one2one 3 retrogenes
retro_tsyr_1189, retro_tsyr_411, retro_tsyr_549,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_328 67.06 96.51
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2. retro_pabe_2717 62.71 66.86
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Download FASTA sequences of all ENSPPYG00000000236 retrocopies