Parental gene:

SMEK2, ENSNLEG00000009338

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397287.1:8591280..8663585(-)


>ENSNLEG00000009338
ATGTCGGATACGCGGCGGCGGGTGAAGGTCTATACCCTGAACGAAGACCGGCAATGGGACGACCGAGGCACCGGGCACGT
CTCCTCCACTTACGTGGAGGAGCTCAAGGGGATGTCGCTGCTGGTTCGGGCAGAGTCCGACGGATCACTGCTCTTGGAAT
CAAAGATAAATCCAAATACTGCATATCAGAAACAACAGGATACATTAATTGTTTGGTCAGAAGCAGAGAACTATGATTTG
GCTCTGAGTTTTCAGGAGAAAGCTGGCTGTGATGAGATCTGGGAAAAAATTTGTCAGGTTCAAGGTAAAGACCCATCAGT
GGAAGTCACACAGGACCTCATTGATGAATCTGAAGAAGAACGATTTGAAGAAATGCCTGAAACTAGTCATCTGATTGACC
TGCCCACGTGTGAACTCAATAAACTTGAAGAGATTGCTGACTTAGTTACCTCAGTGCTTTCCTCACCTATCCGTAGGGAG
AAGCTGGCTCTCGCCTTGGAAAATGAAGGCTATATTAAAAAACTATTGCAGCTGTTCCAAGCTTGCGAGAACCTAGAAAA
CACTGAAGGCTTACACCATTTGTATGAAATTATTAGAGGAATCTTATTCCTAAATAAGGCAACTCTTTTTGAGGTAATGT
TTTCTGATGAGTGTATCATGGATGTCGTAGGATGCCTTGAATATGACCCTGCTTTGGCTCAGCCAAAAAGACATAGAGAA
TTCTTGACCAAAACTGCAAAGTTCAAGGAAGTTATACCAATAACAGACTCTGAACTAAGGCAAAAAATACATCAGACTTA
CAGGGTACAGTACATTCAGGACATCATTTTGCCCACACCATCTGTTTTTGAAGAGAATTTTCTTTCTACTCTTACGTCTT
TTATTTTCTTCAACAAAGTTGAGATAGTCAGCATGTTGCAGGAAGATGAGAAGTTTTTGTCTGAAGTTTTTGCACAATTA
ACAGATGAGGCTACAGATGATGATAAACGGCGTGAATTGGTTAATTTTTTCAAGGAATTTTGTGCATTTTCTCAGACATT
ACAACCTCAAAACAGGGATGCATTTTTCAAAACATTGGCAAAATTGGGAATTCTTCCTGCTCTTGAAATTGTAATGGGCA
TGGATGATTTGCAAGTCAGATCAGCTGCTACAGATATATTTTCTTATCTAGTAGAATTTAGTCCATCTATGGTCCGAGAG
TTTGTAATGCAAGAAGCTCAGCAGAGTGATGACGATATTCTTCTTATTAATGTCGTAATTGAACAAATGATCTGTGATAC
TGATCCTGAGCTAGGAGGCGCTGTTCAGTTAATGGGACTTCTTCGTACTCTAATTGATCCGGAGAACATGCTGGCTACAA
CTAATAAAACTGAAAAAAGTGAATTTCTAAATTTTTTCTACAACCATTGTATGCATGTTCTCACAGCACCACTTTTGACC
AATACTTCAGAAGACAAATGTGAAAAGGATAATATAGTTGGATCAAACAAAAACCACACAATTTGTCCCGATAATTATCA
AACAGCACAGCTACTTGCCTTAATTTTAGAGTTACTCACATTTTGTGTGGAACATCACACATATCACATAAAAAACTATA
TTATGAACAAGGACTTGCTAAGAAGAGTCTTGGTCTTGATGAATTCAAAGCACACTTTTCTGGCCTTGTGTGCCCTTCGC
TTTATGAGGCGGATAATTGGACTTAAAGATGAATTTTATAATCGTTACATCACCAAGGGAAATCTTTTTGAGCCAGTTAT
AAATGCACTTCTGGATAATGGAACTCGGTACAATCTGTTGAATTCAGCTGTTATTGAGTTGTTTGAATTTATAAGAGTGG
AAGATATCAAGTCTCTTACTGCCCATATAGTTGAAAACTTTTATAAAGCACTTGAATCGATTGAATATGTTCAGACATTC
AAAGGATTGAAGACTAAATATGAGCAAGAAAAAGACAGACAAAATCAGAAACTGAACAGTGTACCATCTATATTGCGTAG
TAACAGATTTCGCAGAGATGCAAAAGCCTTGGAAGAGGATGAAGAAATGTGGTTTAATGAAGATGAAGAAGAGGAAGGAA
AAGCAGTTGTGGCACCACTGGAAAAATCTAAGCCAGAAGATGATTTTCCAGATAATTATGAAAAGTTTATGGAGACTAAA
AAAGCAAAAGAAAGTGAAGACAAGGAAAACCTTCCCAAAAGGACATCTCCTGGTGGCTTCAAATTTACTTTCTCCCACTC
TGCCAGTGCTGCTAATGGAACAAACAGTAAATCTGTAGTGGCCCAGACACCACCAGCAACTTCTAATGGATCCTCTTCCA
AAACCACAAACTTGCCTACATCAGTAACAGCCACCAAGGGAAGTTTGGTTGGCTTAGTGGATTATCCAGATGATGAAGAG
GAAGATGATGAAGAAGAAACGTCCCCCAGGAAAAGACCTCGTCTTGGCTCATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003843 ortholog_one2one 1 retrogene
retro_amel_48,
Bos taurus ENSBTAG00000000545 ortholog_one2one 1 retrogene
retro_btau_232,
Canis familiaris ENSCAFG00000002860 ortholog_one2one 1 retrogene
retro_cfam_226,
Equus caballus ENSECAG00000013819 ortholog_one2one 1 retrogene
retro_ecab_23,
Echinops telfairi ENSETEG00000002420 ortholog_one2one 1 retrogene
retro_etel_1699,
Felis catus ENSFCAG00000026457 ortholog_one2one 1 retrogene
retro_fcat_13,
Homo sapiens ENSG00000138041 ortholog_one2one 1 retrogene
retro_hsap_4799,
Loxodonta africana ENSLAFG00000017825 ortholog_one2one 1 retrogene
retro_lafr_791,
Myotis lucifugus ENSMLUG00000003875 ortholog_one2many 1 retrogene
retro_mluc_994,
Macaca mulatta ENSMMUG00000007001 ortholog_one2one 1 retrogene
retro_mmul_238,
Mustela putorius furo ENSMPUG00000002435 ortholog_one2one 1 retrogene
retro_mputfur_92,
Oryctolagus cuniculus ENSOCUG00000006880 ortholog_one2one 1 retrogene
retro_ocun_9,
Otolemur garnettii ENSOGAG00000009837 ortholog_one2one 1 retrogene
retro_ogar_140,
Pan troglodytes ENSPTRG00000011933 ortholog_one2one 1 retrogene
retro_ptro_3191,
Sus scrofa ENSSSCG00000008398 ortholog_one2one 1 retrogene
retro_sscr_1187,
Ictidomys tridecemlineatus ENSSTOG00000006276 ortholog_one2one 1 retrogene
retro_itri_63,
Tursiops truncatus ENSTTRG00000000027 ortholog_one2one 1 retrogene
retro_ttru_1397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_1112 67.97 84.21
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Download FASTA sequences of all ENSNLEG00000009338 retrocopies