Parental gene:

OSTC, ENSSTOG00000021644

Aliases:None
Description:oligosaccharyltransferase complex subunit (non-catalytic) [Source:HGNC Symbol;Acc:24448]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393628.1:39636..52256(-)


>ENSSTOG00000021644
ATGGAGACTTTCTACCGGGTCCCGTTCTTAGTGCTCGAATGCCCCAACCTGAAGCTGAAGAAGCCTCCCTGGGTGCACAT
GCCGTCGGCCATGACGGTGTACGCTCTGGTGGTGGTGTCTTATTTCCTCATCACCGGAGGAATAATTTATGATGTTATTG
TTGAACCTCCGAGTGTTGGCTCTATGACTGATGAACATGGGCATCAGAGGCCAGTAGCTTTCTTGGCCTACAGAGTAAAT
GGACAATATATCATGGAAGGACTTGCATCCAGCTTCCTGTTTACAATGGGAGGTTTAGGCTTCATAATCCTGGACCGATC
CAATGCACCAAATATTCCAAAACTCAATAGATTTCTTCTTCTATTCATTGGATTCGTCTGTGTCCTACTGAGCTTTTTCA
TGGCTAGAGTATTCATGAGAATGAAACTGCCGGGCTATCTGATGGGTTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001753 ortholog_one2one 2 retrogenes
retro_amel_1110, retro_amel_165,
Canis familiaris ENSCAFG00000011286 ortholog_one2one 12 retrogenes
retro_cfam_1129, retro_cfam_1206, retro_cfam_1459, retro_cfam_1462, retro_cfam_1575, retro_cfam_1851, retro_cfam_1910, retro_cfam_1948, retro_cfam_2003, retro_cfam_263, retro_cfam_296, retro_cfam_814,
Callithrix jacchus ENSCJAG00000016002 possible_ortholog 3 retrogenes
retro_cjac_121, retro_cjac_2981, retro_cjac_324,
Cavia porcellus ENSCPOG00000024467 ortholog_one2one 1 retrogene
retro_cpor_659,
Echinops telfairi ENSETEG00000003717 ortholog_one2one 4 retrogenes
retro_etel_1564, retro_etel_492, retro_etel_878, retro_etel_970,
Gorilla gorilla ENSGGOG00000026873 possible_ortholog 6 retrogenes
retro_ggor_1457, retro_ggor_2060, retro_ggor_215, retro_ggor_2427, retro_ggor_370, retro_ggor_385,
Monodelphis domestica ENSMODG00000020599 ortholog_one2one 1 retrogene
retro_mdom_428,
Mustela putorius furo ENSMPUG00000008869 ortholog_one2one 1 retrogene
retro_mputfur_1451,
Mus musculus ENSMUSG00000041084 ortholog_one2one 1 retrogene
retro_mmus_648,
Nomascus leucogenys ENSNLEG00000012929 possible_ortholog 11 retrogenes
retro_nleu_1372, retro_nleu_1436, retro_nleu_2026, retro_nleu_2265, retro_nleu_2274, retro_nleu_2665, retro_nleu_2796, retro_nleu_2826, retro_nleu_297, retro_nleu_474, retro_nleu_923,
Oryctolagus cuniculus ENSOCUG00000011056 possible_ortholog 2 retrogenes
retro_ocun_1318, retro_ocun_7,
Otolemur garnettii ENSOGAG00000033684 possible_ortholog 1 retrogene
retro_ogar_578,
Pteropus vampyrus ENSPVAG00000005915 ortholog_one2one 1 retrogene
retro_pvam_924,
Rattus norvegicus ENSRNOG00000023322 ortholog_one2one 1 retrogene
retro_rnor_2297,
Sus scrofa ENSSSCG00000009145 ortholog_one2one 1 retrogene
retro_sscr_503,
Tarsius syrichta ENSTSYG00000000724 ortholog_one2one 2 retrogenes
retro_tsyr_1193, retro_tsyr_921,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_15 88.98 79.19
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2. retro_itri_789 91.28 99.33
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3. retro_itri_863 64.29 83.22
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4. retro_itri_1211 93.75 63.76
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5. retro_itri_1386 72.04 61.74
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6. retro_itri_1571 61.32 68.46
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Download FASTA sequences of all ENSSTOG00000021644 retrocopies