Parental gene:

ENSOANG00000012228

Aliases:None
Description:None
Organism:Platypus (Ornithorhynchus anatinus)
Coordinates:2:36623926..36653410(+)


>ENSOANG00000012228
ATGCTGGTAGCCGACAAGATCCTTCGATGGGAAAGAGCCTGGTTTCCACCTGCCCTCATGGGTGTGATTTCTCTGGTATT
TCTGTTGGTCTACTACTTGGATCCGTCGGTGCTGTCTGGGGTTTCTTGCTTTGTTATGTTTTTGTGCCTGGCTGATTACC
TTGTTCCCATTCTCGCGCCTAGAATTTTTGGCTCCAACAAATGGACCACTGAACAACAGCAAAGATTTCATGAAATTTGC
AGTAACCTAGTAAAAACTCGACGGAGAATTGTTGGCTGGTGGAAGCGTCTCTTCACGTTGAAGGAGGAAAAGCCTAAAAT
GTACTTCATGACCATGATCCTTTCTCTGGCTGCCGTTGCCTGGGTAGGACAGCAGGTTCACAATCTCTTCCTCACCTACC
TTATTGCCACCATGGTGCGCATGAACGTCCTGGCGGATGCTCTGAAAAGCATCAACAATGCAGAGAAACGAGGAAAACGC
CAGGTCCTCATTAGGCCGTGCTCCAAAGTCATCGTCAGGTTTTTAACTGTGATGATGAAGCATGGCTACATTGGCGAATT
TGAAATCATTGATGATCACAGAGCTGGGAAAATTGTTGTCAACCTCACAGGCAGATTGAACAAGTGTGGAGTGATCAGTC
CCAGATTTGATGTTCAACTGAAAGATCTGGAAAAGTGGCAGAACAACTTGCTGCCGTCACGCCAGTTTGGGTTTATTGTG
CTTACAACCTCAGCTGGCATCATGGACCATGAGGAAGCAAGACGAAAACACACAGGAGGCAAAATCCTGGGATTCTTTTT
CTAA

Library Parental gene expression (RPM)
SRP007412_brain 505 .94 RPM
SRP007412_cerebellum 375 .78 RPM
SRP007412_heart 351 .66 RPM
SRP007412_kidney 445 .03 RPM
SRP007412_liver 238 .22 RPM
SRP007412_testis 612 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018174 ortholog_one2one 20 retrogenes
retro_cfam_114, retro_cfam_1204, retro_cfam_1232, retro_cfam_1261, retro_cfam_127, retro_cfam_1301, retro_cfam_1348, retro_cfam_1364, retro_cfam_1525, retro_cfam_1582, retro_cfam_1605, retro_cfam_1642, retro_cfam_1745, retro_cfam_1966, retro_cfam_21, retro_cfam_427, retro_cfam_464, retro_cfam_699, retro_cfam_831, retro_cfam_888,
Callithrix jacchus ENSCJAG00000020068 possible_ortholog 2 retrogenes
retro_cjac_782, retro_cjac_857,
Homo sapiens ENSG00000170540 possible_ortholog 3 retrogenes
retro_hsap_1393, retro_hsap_559, retro_hsap_902,
Macropus eugenii ENSMEUG00000007896 ortholog_one2one 1 retrogene
retro_meug_1842,
Monodelphis domestica ENSMODG00000005944 ortholog_one2one 1 retrogene
retro_mdom_794,
Sarcophilus harrisii ENSSHAG00000017346 ortholog_one2one 1 retrogene
retro_shar_691,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oana_77 72.46 51.31
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2. retro_oana_100 62.77 50.56
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Download FASTA sequences of all ENSOANG00000012228 retrocopies