Parental gene:

N6AMT1, ENSOCUG00000001084

Aliases:None
Description:N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:HGNC Symbol;Acc:16021]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:14:158226723..158245946(+)


>ENSOCUG00000001084
ATGGCGGCGGCAAGCTTCCCCACCCCGCTGTATGGCCACGTGGGTCACGGGGCCTTTAGCGACGTGTACGAGCCCGCGGA
GGACACATTCCTGCTGCTGGATGCGCTCGAGGCGGCTGCAGCCGAGCTGGCGCGTGTGGAAATATGCCTGGAAGTAGGGT
CCGGGTCTGGTGTGGTGTCTGCATTCCTGGCCTCTCTGATAGGTCCTCAGGCTCTGTACATGTGCACTGACATCAACCCT
GAGGCAGCAGCTTGTACACTGGAGACAGCACGTTGTAACCAAGTTCATATTCAACCAGTAATTACAGATTTGGTCAAAGG
CTTGCTACCAAGATTGAAGGGAAAAGTTGATCTCCTAGTATTTAATCCTCCCTATGTGGTGACTCCACCCGAAGAGGTAG
GAAGTCATGGAATACAGGCAGCATGGGCTGGTGGCAGAAATGGCCGAGAAGTCATGGACAGAGTTTTCCCCCTAGTTACA
GAGCTGCTGTCCCCAAGAGGATTATTCTACTTGGTTACCATAAAAGAAAATAATCCAGAAGAAATTTTGGAAACTATGAG
GATAAAAGGTCTGCATGGGACCACTGCACTCTCCAGGCAAACAGGCCAAGAAATCCTTTCAGTGCTCAAGTTCTCCAAGT
CCTGA

Library Parental gene expression (RPM)
SRP017611_brain 1 .27 RPM
SRP017611_kidney 1 .62 RPM
SRP017611_liver 1 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005227 ortholog_one2one 1 retrogene
retro_chof_1139,
Homo sapiens ENSG00000156239 ortholog_one2one 1 retrogene
retro_hsap_916,
Gorilla gorilla ENSGGOG00000022382 ortholog_one2one 1 retrogene
retro_ggor_739,
Nomascus leucogenys ENSNLEG00000002845 ortholog_one2one 1 retrogene
retro_nleu_282,
Ochotona princeps ENSOPRG00000001551 ortholog_one2one 3 retrogenes
retro_opri_200, retro_opri_867, retro_opri_925,
Pongo abelii ENSPPYG00000011314 ortholog_one2one 1 retrogene
retro_pabe_790,
Pan troglodytes ENSPTRG00000013817 ortholog_one2one 1 retrogene
retro_ptro_635,
Pteropus vampyrus ENSPVAG00000012777 ortholog_one2one 2 retrogenes
retro_pvam_1166, retro_pvam_1200,
Sus scrofa ENSSSCG00000026046 ortholog_one2many 1 retrogene
retro_sscr_130,
Ictidomys tridecemlineatus ENSSTOG00000021743 ortholog_one2one 1 retrogene
retro_itri_497,
Tupaia belangeri ENSTBEG00000001269 ortholog_one2one 1 retrogene
retro_tbel_777,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_521 53.97 56.07
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Download FASTA sequences of all ENSOCUG00000001084 retrocopies