Parental gene:

N6AMT1, ENSPTRG00000013817

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:21:15051770..15060954(-)


>ENSPTRG00000013817
ATGGCAGGGCAGAGCTTCGCTACGCCGTTCCACGGGCACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGCCCGCGGA
GGACACGTTTCTGCTTTTGGACGCGCTCGAGGCAGCGGCTGCCGAGCTGGCAAGAGTGGAAATATGCCTGGAAGTAGGGT
CAGGGTCTGGTGTAGTATCTGCATTCCTAGCCTCTATGATAGGCCCTCAGGCTTTGTACATGTGCACTGATATCAACCCT
GAGGCAGCAGCTTGTACCCTAGAGACAGCACGCTGTAACAAAGTTCACATTCAACCAGTTATTACAGATTTGGTCAAAGG
CTTGCTACCAAGATTGACGGAAAAAGTTGATCTTCTGGTGTTTAATCCCCCCTATGTAGTGACTCCACCTCAAGAGGTAG
GAAGTCACGGAATAGAGGCAGCTTGGGCTGGTGGCAGAAATGGTCGGGAAGTCATGGACAGGTTTTTTCCCCTGGTTCCA
GATCTCCTTTCACCAAGAGGATTATTCTATTTAGTTACCATTAAAGAAAACAACCCAGAAGAAATTTTGAAAATAATGAA
GACAAAAGGTCTGCAAGGAACCACTGCACTTTCCAGACAAGCAGGCCGAGAAACTCTTTCAGTCCTCAAGTTCACCAAGT
CTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .98 RPM
SRP007412_cerebellum 1 .08 RPM
SRP007412_heart 3 .35 RPM
SRP007412_kidney 3 .01 RPM
SRP007412_liver 0 .92 RPM
SRP007412_testis 2 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005227 ortholog_one2one 1 retrogene
retro_chof_1139,
Homo sapiens ENSG00000156239 ortholog_one2one 1 retrogene
retro_hsap_916,
Gorilla gorilla ENSGGOG00000022382 ortholog_one2one 1 retrogene
retro_ggor_739,
Nomascus leucogenys ENSNLEG00000002845 ortholog_one2one 1 retrogene
retro_nleu_282,
Oryctolagus cuniculus ENSOCUG00000001084 ortholog_one2one 1 retrogene
retro_ocun_521,
Ochotona princeps ENSOPRG00000001551 ortholog_one2one 3 retrogenes
retro_opri_200, retro_opri_867, retro_opri_925,
Pongo abelii ENSPPYG00000011314 ortholog_one2one 1 retrogene
retro_pabe_790,
Pteropus vampyrus ENSPVAG00000012777 ortholog_one2one 2 retrogenes
retro_pvam_1166, retro_pvam_1200,
Sus scrofa ENSSSCG00000026046 ortholog_one2many 1 retrogene
retro_sscr_130,
Ictidomys tridecemlineatus ENSSTOG00000021743 ortholog_one2one 1 retrogene
retro_itri_497,
Tupaia belangeri ENSTBEG00000001269 ortholog_one2one 1 retrogene
retro_tbel_777,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_635 85.99 96.73
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Download FASTA sequences of all ENSPTRG00000013817 retrocopies