Parental gene:

N6AMT1, ENSPPYG00000011314

Aliases:None
Description:N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:HGNC Symbol;Acc:16021]
Organism:Orangutan (Pongo abelii)
Coordinates:21:29545287..29558735(-)


>ENSPPYG00000011314
ATGGCAGGGCAGAGCTTTCCTACGCCGTTGCACGGGCACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGCCCGCGGA
GGACACGTTTCTGCTTTTGGACGCGCTCGAGGCAGCGGCTGCCGAGCTGGCAGGAGTGGAAATATGCCTGGAAGTAGGGT
CAGGGTCTGGTGTAGTATCTGCATTCCTAGCTTCTATGATAGGCCCTCAGGCTTTGTACATGTGCACTGATATCAACCCT
GAGGCAGCAGCTTGTACCCTAGAGACAGCACGCTGTAACAAAGTTTACATTCAACCAGTTATTACAGATTTGGTCAAAGG
CTTGCTACCAAGATTGAAGGAAAAAGTTGATCTTCTGGTGTTTAATCCCCCATATGTAGTGACTCCACCTCAAGAGGTAG
GAAGTCACGGAATAGAGGCAGCTTGGGCTGGTGGCAGAAACGGTCGGGAAGTTATGGACAGGTTTTTTCCCCTGGTTCCA
GATCTCCTTTCACCAAGAGGATTATTCTATTTAGTTACCATTAAAGAAAACAACCCAGAAGAAATTTTGAAAATAATGAA
GACAAAAGGTCTGCAAGGAACCACTGCACTTTCCAGACAAGCAGGCCAAGAAACTCTTTCAGTCCTTAAGTTCACCAAGT
CTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .49 RPM
SRP007412_cerebellum 5 .23 RPM
SRP007412_heart 3 .13 RPM
SRP007412_kidney 3 .81 RPM
SRP007412_liver 1 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005227 ortholog_one2one 1 retrogene
retro_chof_1139,
Homo sapiens ENSG00000156239 ortholog_one2one 1 retrogene
retro_hsap_916,
Gorilla gorilla ENSGGOG00000022382 ortholog_one2one 1 retrogene
retro_ggor_739,
Nomascus leucogenys ENSNLEG00000002845 ortholog_one2one 1 retrogene
retro_nleu_282,
Oryctolagus cuniculus ENSOCUG00000001084 ortholog_one2one 1 retrogene
retro_ocun_521,
Ochotona princeps ENSOPRG00000001551 ortholog_one2one 3 retrogenes
retro_opri_200, retro_opri_867, retro_opri_925,
Pan troglodytes ENSPTRG00000013817 ortholog_one2one 1 retrogene
retro_ptro_635,
Pteropus vampyrus ENSPVAG00000012777 ortholog_one2one 2 retrogenes
retro_pvam_1166, retro_pvam_1200,
Sus scrofa ENSSSCG00000026046 ortholog_one2many 1 retrogene
retro_sscr_130,
Ictidomys tridecemlineatus ENSSTOG00000021743 ortholog_one2one 1 retrogene
retro_itri_497,
Tupaia belangeri ENSTBEG00000001269 ortholog_one2one 1 retrogene
retro_tbel_777,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_790 89.37 96.73
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Download FASTA sequences of all ENSPPYG00000011314 retrocopies