Parental gene:

ISCA1, ENSOCUG00000010945

Aliases:None
Description:iron-sulfur cluster assembly 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28660]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:1:72263425..72274592(-)


>ENSOCUG00000010945
ATGTCGGCTTCCTTAGTTCGCGCCACTGTCCGGGCTGTGAGCAAGAGGAAGCTGCAGCCCACCCGGGCCGCCCTTACCCT
GACACCATCGGCAGTAAACAAGATAAAACAACTTCTTAAAGATAAGCCTGAGCATGTAGGTGTAAAAGTTGGCGTCCGAA
CCAGGGGCTGTAACGGCCTTTCTTATACTCTAGAATATACGAAGACAAAAGGAGATTCTGACGAAGAAGTCGTTCAGGAC
GGAGTCAGAGTGTTCATCGAGAAGAAAGCCCAGCTAACACTCTTAGGAACAGAAATGGACTATGTTGAAGACAAATTATC
CAGTGAGTTTGTGTTCAATAACCCAAACATCAAAGGAACTTGCGGCTGTGGAGAAAGCTTTAACATTTGA

Library Parental gene expression (RPM)
SRP017611_brain 41 .72 RPM
SRP017611_kidney 41 .05 RPM
SRP017611_liver 10 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000046526 possible_ortholog 2 retrogenes
retro_btau_1787, retro_btau_506,
Callithrix jacchus ENSCJAG00000001940 possible_ortholog 6 retrogenes
retro_cjac_1623, retro_cjac_1734, retro_cjac_1870, retro_cjac_2608, retro_cjac_350, retro_cjac_672,
Dasypus novemcinctus ENSDNOG00000010652 possible_ortholog 5 retrogenes
retro_dnov_1162, retro_dnov_142, retro_dnov_1956, retro_dnov_431, retro_dnov_95,
Echinops telfairi ENSETEG00000016537 possible_ortholog 1 retrogene
retro_etel_1857,
Gorilla gorilla ENSGGOG00000007518 possible_ortholog 2 retrogenes
retro_ggor_1182, retro_ggor_92,
Monodelphis domestica ENSMODG00000003559 ortholog_one2one 1 retrogene
retro_mdom_583,
Mus musculus ENSMUSG00000044792 ortholog_one2many 1 retrogene
retro_mmus_278,
Pongo abelii ENSPPYG00000019339 possible_ortholog 5 retrogenes
retro_pabe_1287, retro_pabe_2043, retro_pabe_2744, retro_pabe_2745, retro_pabe_367,
Rattus norvegicus ENSRNOG00000018343 ortholog_one2one 4 retrogenes
retro_rnor_1177, retro_rnor_1805, retro_rnor_2254, retro_rnor_2956,
Tarsius syrichta ENSTSYG00000012826 ortholog_one2one 2 retrogenes
retro_tsyr_1060, retro_tsyr_1698,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1685 57.35 51.16
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Download FASTA sequences of all ENSOCUG00000010945 retrocopies