Parental gene: | ISCA1, ENSPPYG00000019339 |
| Aliases: | None |
| Description: | iron-sulfur cluster assembly 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28660] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 9:81468571..81485315(-) |
>ENSPPYG00000019339
ATGCAACCCACCCAATGGTGGCGGCGGGGGGGCGGGGCTAGGCCTGAGGGCGCCGTGCGCCGAAGCTTGTGGCGTCAATG
CGCCCGCTGTGTCCATGGAGAGAGGCTGAGGTGGGCGACCTCCGGCCCGAGGCACCGGGGCGCCGGGACGGCGAAGATGT
CGGCTTCCTTAGTCCGGGCAACTGTCCGGGCTGTGAGCAAGAGGAAGCTGCAGCCCACCCGGGCAGCCCTCACCCTGACA
CCTTCAGCAGTAAACAAGATAAAACAACTTCTTAAAGATAAGCCTGAGCATGTAGGTGTAAAAGTTGGTGTCCGAACCAG
GGGCTGTAATGGCCTTTCCTATACTCTAGAATATACAAAGACAAAAGGAGATTCTGATGAAGAAGTTATTCAAGATGGAG
TCAGAGTATTCATCGAGAAGAAAGCACAGCTAACACTTTTAGGAACAGAAATGGACTATGTTGAAGACAAATTATCCAGT
GAGTTTGTGTTCAATAACCCAAACATCAAAGGGACTTGTGGCTGTGGAGAAAGCTTTAATATTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 31 .46 RPM |
| SRP007412_cerebellum | 32 .10 RPM |
| SRP007412_heart | 18 .54 RPM |
| SRP007412_kidney | 11 .54 RPM |
| SRP007412_liver | 9 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046526 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000001336 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001940 | ortholog_one2one | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000011872 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000010652 | possible_ortholog | 5 retrogenes | |
| Equus caballus | ENSECAG00000011465 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016537 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000135070 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007518 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000003889 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001288 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003399 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003559 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000044792 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005129 | possible_ortholog | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010945 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015628 | possible_ortholog | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000021075 | ortholog_one2one | 7 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000004588 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018343 | ortholog_one2many | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000010953 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012826 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004231 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_367 | 91.23 | 62.98 | Please wait, loading  |
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| 2. | retro_pabe_1287 | 75.88 | 92.82 | Please wait, loading |
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| 3. | retro_pabe_2043 | 94.84 | 85.64 | Please wait, loading |
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| 4. | retro_pabe_2744 | 90.57 | 87.85 | Please wait, loading |
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| 5. | retro_pabe_2745 | 96.06 | 70.17 | Please wait, loading |
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Download FASTA sequences of all ENSPPYG00000019339 retrocopies