Parental gene:

ENSG00000135070, ENSGGOG00000007518

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:68207414..68226460(-)


>ENSGGOG00000007518
ATGGTGGCGGCGGGGGGCGGGGCTAGGACTGAGGGCGCCGTGCGCCGAAGCTTGTGGCGTCAATGCGCCTGCCGTGTCCA
TGGAGAGAAGCTGAAGCAGCCGACCTTCGGCCCGAGGCACCGGGGCGCCGGGACGGCGAAGATGTCGGCTTCCTTAGTCC
GGGCAACTGTCCGGGCTGTGAGCAAGAGGAAGCTGCAGCCCACCCGGGCAGCCCTCACCCTGACACCTTCAGCAGTAAAC
AAGATAAAACAACTTCTTAAAGATAAGCCTGAGCATGTAGGTGTAAAAGTTGGTGTCCGAACCAGGGGCTGTAATGGCCT
TTCTTATACTCTAGAATATACAAAGACAAAAGGAGATTCTGATGAAGAAGTTATTCAAGATGGAGTCAGAGTATTCATCG
AAAAGAAAGCACAGCTAACACTTTTAGGAACAGAAATGGACTATGTTGAAGACAAATTATCCAGTGAGTTTGTGTTCAAT
AACCCAAACATCAAAGGGACTTGTGGCTGTGGAGAAAGCTTTAATATTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .92 RPM
SRP007412_cerebellum 15 .84 RPM
SRP007412_heart 3 .75 RPM
SRP007412_kidney 16 .19 RPM
SRP007412_liver 9 .42 RPM
SRP007412_testis 9 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000046526 possible_ortholog 2 retrogenes
retro_btau_1787, retro_btau_506,
Canis familiaris ENSCAFG00000001336 possible_ortholog 1 retrogene
retro_cfam_1087,
Callithrix jacchus ENSCJAG00000001940 ortholog_one2many 6 retrogenes
retro_cjac_1623, retro_cjac_1734, retro_cjac_1870, retro_cjac_2608, retro_cjac_350, retro_cjac_672,
Cavia porcellus ENSCPOG00000011872 possible_ortholog 2 retrogenes
retro_cpor_1383, retro_cpor_768,
Dasypus novemcinctus ENSDNOG00000010652 possible_ortholog 5 retrogenes
retro_dnov_1162, retro_dnov_142, retro_dnov_1956, retro_dnov_431, retro_dnov_95,
Equus caballus ENSECAG00000011465 possible_ortholog 1 retrogene
retro_ecab_936,
Echinops telfairi ENSETEG00000016537 possible_ortholog 1 retrogene
retro_etel_1857,
Homo sapiens ENSG00000135070 ortholog_one2many 6 retrogenes
retro_hsap_1556, retro_hsap_1768, retro_hsap_1975, retro_hsap_2314, retro_hsap_317, retro_hsap_3329,
Microcebus murinus ENSMICG00000003889 possible_ortholog 1 retrogene
retro_mmur_1399,
Myotis lucifugus ENSMLUG00000001288 possible_ortholog 1 retrogene
retro_mluc_1620,
Macaca mulatta ENSMMUG00000003399 ortholog_one2many 3 retrogenes
retro_mmul_1230, retro_mmul_1365, retro_mmul_2211,
Monodelphis domestica ENSMODG00000003559 ortholog_one2many 1 retrogene
retro_mdom_583,
Mus musculus ENSMUSG00000044792 ortholog_many2many 1 retrogene
retro_mmus_278,
Nomascus leucogenys ENSNLEG00000005129 possible_ortholog 5 retrogenes
retro_nleu_1674, retro_nleu_1725, retro_nleu_2330, retro_nleu_2618, retro_nleu_2782,
Oryctolagus cuniculus ENSOCUG00000010945 possible_ortholog 1 retrogene
retro_ocun_1685,
Otolemur garnettii ENSOGAG00000015628 possible_ortholog 5 retrogenes
retro_ogar_1267, retro_ogar_1545, retro_ogar_2186, retro_ogar_2813, retro_ogar_935,
Pongo abelii ENSPPYG00000019339 ortholog_one2many 5 retrogenes
retro_pabe_1287, retro_pabe_2043, retro_pabe_2744, retro_pabe_2745, retro_pabe_367,
Pan troglodytes ENSPTRG00000021075 ortholog_one2many 7 retrogenes
retro_ptro_1047, retro_ptro_1185, retro_ptro_1316, retro_ptro_1689, retro_ptro_2149, retro_ptro_256, retro_ptro_2842,
Pteropus vampyrus ENSPVAG00000004588 possible_ortholog 1 retrogene
retro_pvam_956,
Rattus norvegicus ENSRNOG00000018343 ortholog_one2many 4 retrogenes
retro_rnor_1177, retro_rnor_1805, retro_rnor_2254, retro_rnor_2956,
Sus scrofa ENSSSCG00000010953 possible_ortholog 1 retrogene
retro_sscr_558,
Tarsius syrichta ENSTSYG00000012826 possible_ortholog 2 retrogenes
retro_tsyr_1060, retro_tsyr_1698,
Tursiops truncatus ENSTTRG00000004231 possible_ortholog 1 retrogene
retro_ttru_1317,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_92 98.45 73.30
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2. retro_ggor_1182 74.71 95.45
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Download FASTA sequences of all ENSGGOG00000007518 retrocopies