RetrogeneDB ID: | retro_etel_1857 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_308387:43264..43648(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000016537 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.18 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MSASLVRATVRAVSKRKLQATRAALTLTPSAVHKIKQLLKDKPEH-VGLKVGVRTRGCNGLSYTLEYTKT |
M.ASLV.ATV.AV.KRK.QAT..ALTLTPSAVHKI.QLLK.KPE..VGLK.GV.....NGLSYTL.Y.K. | |
Retrocopy | MLASLVQATVWAVNKRKPQATWVALTLTPSAVHKITQLLKEKPEG>VGLKFGV*IGAPNGLSYTLDYPKM |
Parental | K-GDSDEEVVQDGVKVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESFNI |
......E.V...G..V.IEKKA..TLLGTE.D.V.DKLSS..VFNNPNIKG.CGCGE.F.I | |
Retrocopy | E<DSVEEVVQDGGT-VVIEKKAETTLLGTETDHVKDKLSSDHVFNNPNIKGICGCGENFRI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |