Parental gene:

ENSOCUG00000016739

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:X:68190831..68291165(+)


>ENSOCUG00000016739
ATGGTTGGTTCAGCCCCCGTCTACTCCGGGGTGGTGCTTAGCCGGCGCCAGACCGACCCTCGACTTCGGAGGGGCAGTGC
CGTTCCTCTAGGTGCTTCGTCCTCACCTTCTTCGACTTCTGTAGCCTCTTCGACCTCTTTAGCTTCCGCAGAAACCCGAG
ACCCCGGTGTATGCCCCACCCCTGACCCGGCGAGAGATATGTCCACCCCGGCTCGCCGGCGCCTCATGCGGGACTTTAAG
AGGTTACAGGAGGATCCTCCAGCTGGAGTCAGCGGGGCTCCTTCTGAGAACAACATAATGGTTTGGAATGCGGTCATTTT
TGGGCCCGAGGGGACCCCATTTGAGGATGGAACATTCAAACTTACAATAGAATTCACTGAAGAATATCCAAACAAGCCAC
CCACGGTTAGATTTGTCTCTAAGATGTTTCATCCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAAC
CGCTGGAGTCCAACCTATGATGTATCTTCCATTTTAACATCCATACAGTCTCTATTGGATGAACCAAATCCCAATAGTCC
AGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAGCGGGAATATGAAAAGCGTGTTTCTGCCATAGTAGAACAGA
GCTGGCGTGATTGTTGA

Library Parental gene expression (RPM)
SRP017611_brain 50 .39 RPM
SRP017611_kidney 38 .92 RPM
SRP017611_liver 9 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001079 ortholog_one2many 1 retrogene
retro_chof_1316,
Callithrix jacchus ENSCJAG00000005098 ortholog_one2many 2 retrogenes
retro_cjac_1180, retro_cjac_3862,
Cavia porcellus ENSCPOG00000011908 ortholog_one2many 1 retrogene
retro_cpor_489,
Dasypus novemcinctus ENSDNOG00000007060 ortholog_one2many 1 retrogene
retro_dnov_215,
Macropus eugenii ENSMEUG00000003026 ortholog_one2many 1 retrogene
retro_meug_2180,
Monodelphis domestica ENSMODG00000010209 ortholog_one2many 1 retrogene
retro_mdom_341,
Otolemur garnettii ENSOGAG00000024335 ortholog_one2many 1 retrogene
retro_ogar_3203,
Procavia capensis ENSPCAG00000005045 ortholog_one2many 1 retrogene
retro_pcap_222,
Sus scrofa ENSSSCG00000012621 ortholog_one2many 1 retrogene
retro_sscr_29,
Tarsius syrichta ENSTSYG00000000888 ortholog_one2many 1 retrogene
retro_tsyr_676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_183 97.83 63.30
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Download FASTA sequences of all ENSOCUG00000016739 retrocopies