Parental gene:

UBE2A, ENSSSCG00000012621

Aliases:None
Description:ubiquitin-conjugating enzyme E2A [Source:HGNC Symbol;Acc:12472]
Organism:Pig (Sus scrofa)
Coordinates:X:113657315..113666924(-)


>ENSSSCG00000012621
ATGTCCACCCCGGCTCGGCGGCGCCTCATGAGGGACTTCAAGAGGTTGCAGGAAGATCCTCCAGCCGGAGTCAGCGGGGC
TCCGTCCGAGAACAACATCATGGTTTGGAACGCGGTCATTTTTGGGCCCGAAGGGACCCCGTTTGAGGATGGAACCTTTA
AGCTTACAATAGAATTCACTGAAGAATATCCAAATAAGCCACCAACAGTTAGATTTGTCTCTAAGATGTTTCATCCAAAT
GTCTATGCAGATGGTAGCATATGTCTGGACATACTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTTCCATTTTAAC
ATCCATACAGTCTCTATTGGACGAACCTAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAAGAGAACA
AGCGCGAGTATGAAAAACGTGTTTCTGCGATAGTAGAACAGAGCTGGCGTGACTGTTGA

Library Parental gene expression (RPM)
SRP014902_placenta 15 .79 RPM
SRP014902_testis 16 .97 RPM
SRP018856_adipose 14 .40 RPM
SRP018288_kidney 44 .23 RPM
SRP018288_lung 32 .58 RPM
SRP018288_liver 22 .71 RPM
SRP018288_heart 34 .18 RPM
SRP035408_liver 29 .47 RPM
SRP035408_brain 62 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001079 ortholog_one2one 1 retrogene
retro_chof_1316,
Callithrix jacchus ENSCJAG00000005098 ortholog_one2one 2 retrogenes
retro_cjac_1180, retro_cjac_3862,
Cavia porcellus ENSCPOG00000011908 ortholog_one2one 1 retrogene
retro_cpor_489,
Dasypus novemcinctus ENSDNOG00000007060 ortholog_one2one 1 retrogene
retro_dnov_215,
Macropus eugenii ENSMEUG00000003026 ortholog_one2one 1 retrogene
retro_meug_2180,
Monodelphis domestica ENSMODG00000010209 ortholog_one2one 1 retrogene
retro_mdom_341,
Oryctolagus cuniculus ENSOCUG00000016739 ortholog_one2many 1 retrogene
retro_ocun_183,
Otolemur garnettii ENSOGAG00000024335 ortholog_one2one 1 retrogene
retro_ogar_3203,
Procavia capensis ENSPCAG00000005045 ortholog_one2one 1 retrogene
retro_pcap_222,
Tarsius syrichta ENSTSYG00000000888 ortholog_one2one 1 retrogene
retro_tsyr_676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_29 94.04 99.34
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Download FASTA sequences of all ENSSSCG00000012621 retrocopies