Parental gene:

ATP6V1G1, ENSOCUG00000026252

Aliases:None
Description:ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 [Source:HGNC Symbol;Acc:864]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018699:13075088..13082752(-)


>ENSOCUG00000026252
ATGGCCAGCCAGTCGCAGGGGATCCAGCAGCTGCTGCAGGCCGAGAAGCGGGCGGCGGAGAAGGTGTCGGAGGCCCGCAA
GCGAAAGAACCGGAGGCTGAAGCAGGCCAAAGAAGAAGCACAGGCTGAAATTGAACAGTACCGCCTGCAGAGGGAGAAGG
AGTTCAAGGCCAAGGAAGCTGCGGCGCTGGGATCCCACGGCAGTTGCAGCAGCGAAGTAGAGAAGGAGACCCAGGAGAAG
ATGACCATCCTGCAGACCTACTTCCAGCAGAACAGGGATGAGGTCTTGGATAACCTCTTGGCCTTTGTCTGTGACATCCG
GCCAGAAATCCATGAGAACTACCGCATAAACGGATAG

Library Parental gene expression (RPM)
SRP017611_brain 52 .87 RPM
SRP017611_kidney 64 .16 RPM
SRP017611_liver 26 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012509 ortholog_one2one 3 retrogenes
retro_amel_1053, retro_amel_376, retro_amel_999,
Callithrix jacchus ENSCJAG00000020461 possible_ortholog 3 retrogenes
retro_cjac_1788, retro_cjac_2513, retro_cjac_76,
Dasypus novemcinctus ENSDNOG00000008083 ortholog_one2one 15 retrogenes
retro_dnov_1173, retro_dnov_1447, retro_dnov_1475, retro_dnov_1504, retro_dnov_1588, retro_dnov_1645, retro_dnov_193, retro_dnov_1998, retro_dnov_2179, retro_dnov_218, retro_dnov_2416, retro_dnov_245, retro_dnov_336, retro_dnov_479, retro_dnov_790,
Dipodomys ordii ENSDORG00000014850 ortholog_one2one 5 retrogenes
retro_dord_434, retro_dord_466, retro_dord_614, retro_dord_640, retro_dord_749,
Echinops telfairi ENSETEG00000008080 ortholog_one2one 3 retrogenes
retro_etel_350, retro_etel_594, retro_etel_996,
Felis catus ENSFCAG00000000160 ortholog_one2one 2 retrogenes
retro_fcat_1614, retro_fcat_402,
Loxodonta africana ENSLAFG00000013437 ortholog_one2one 2 retrogenes
retro_lafr_1002, retro_lafr_39,
Myotis lucifugus ENSMLUG00000008657 possible_ortholog 2 retrogenes
retro_mluc_373, retro_mluc_839,
Macaca mulatta ENSMMUG00000004899 possible_ortholog 4 retrogenes
retro_mmul_1783, retro_mmul_2018, retro_mmul_2046, retro_mmul_331,
Monodelphis domestica ENSMODG00000019574 ortholog_one2one 1 retrogene
retro_mdom_1675,
Mustela putorius furo ENSMPUG00000001653 ortholog_one2one 3 retrogenes
retro_mputfur_1338, retro_mputfur_922, retro_mputfur_994,
Mus musculus ENSMUSG00000039105 possible_ortholog 5 retrogenes
retro_mmus_2028, retro_mmus_2784, retro_mmus_2787, retro_mmus_3316, retro_mmus_819,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_368 58.97 66.10
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2. retro_ocun_639 93.28 100.00
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3. retro_ocun_1411 76.47 85.59
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Download FASTA sequences of all ENSOCUG00000026252 retrocopies