Parental gene: | RPS3, ENSOGAG00000005318 |
| Aliases: | None |
| Description: | ribosomal protein S3 [Source:HGNC Symbol;Acc:10420] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873520.1:27006502..27023581(-) |
>ENSOGAG00000005318
ATGGCGGTTCAGATCTCCAAGAAGAGGAAGTTCGTTGCTGATGGCATCTTCAAAGCTGAACTGAATGAATTTCTTACTCG
TGAACTGGCTGAAGATGGCTACTCTGGAGTTGAGGTCCGAGTTACACCAACCAGGACAGAAATCATTATCTTAGCCACCA
GAACACAGAATGTTCTTGGTGAGAAGGGCCGACGCATTCGGGAACTGACTGCTGTAGTTCAGAAAAGGTTTGGCTTCCCA
GAGGGCAGTGTAGAGCTTTATGCTGAAAAGGTGGCCACAAGAGGTCTGTGTGCCATTGCCCAGGCAGAATCTCTGCGTTA
CAAACTCCTTGGAGGCCTTGCAGTGCGGAGAAGAGCCTGCTATGGTGTGCTACGATTTATCATGGAGAGTGGAGCCAAGG
GATGCGAGGTTGTGGTGTCTGGGAAACTCCGAGGACAGAGGGCGAAGTCCATGAAGTTTGTGGATGGCTTGATGATCCAC
AGTGGGGACCCTGTTAACTACTACGTTGACACCGCAGTACGCCATGTGCTGCTCCGACAGGGTGTGTTGGGCATTAAGGT
GAAGATCATGCTACCTTGGGACCCTACTGGTAAGATTGGTCCTAAGAAACCTCTGCCTGATCACGTGAGCATCGTGGAAC
CCAAAGATGAGATACTGCCTACTACCCCTATCTCGGAACAGAAGGGTGGGAAGCCAGAGCCACCTGCCATGCCCCAGCCA
GTCCCCACAGCATAA
ATGGCGGTTCAGATCTCCAAGAAGAGGAAGTTCGTTGCTGATGGCATCTTCAAAGCTGAACTGAATGAATTTCTTACTCG
TGAACTGGCTGAAGATGGCTACTCTGGAGTTGAGGTCCGAGTTACACCAACCAGGACAGAAATCATTATCTTAGCCACCA
GAACACAGAATGTTCTTGGTGAGAAGGGCCGACGCATTCGGGAACTGACTGCTGTAGTTCAGAAAAGGTTTGGCTTCCCA
GAGGGCAGTGTAGAGCTTTATGCTGAAAAGGTGGCCACAAGAGGTCTGTGTGCCATTGCCCAGGCAGAATCTCTGCGTTA
CAAACTCCTTGGAGGCCTTGCAGTGCGGAGAAGAGCCTGCTATGGTGTGCTACGATTTATCATGGAGAGTGGAGCCAAGG
GATGCGAGGTTGTGGTGTCTGGGAAACTCCGAGGACAGAGGGCGAAGTCCATGAAGTTTGTGGATGGCTTGATGATCCAC
AGTGGGGACCCTGTTAACTACTACGTTGACACCGCAGTACGCCATGTGCTGCTCCGACAGGGTGTGTTGGGCATTAAGGT
GAAGATCATGCTACCTTGGGACCCTACTGGTAAGATTGGTCCTAAGAAACCTCTGCCTGATCACGTGAGCATCGTGGAAC
CCAAAGATGAGATACTGCCTACTACCCCTATCTCGGAACAGAAGGGTGGGAAGCCAGAGCCACCTGCCATGCCCCAGCCA
GTCCCCACAGCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017051 | ortholog_one2many | 2 retrogenes | |
| Bos taurus | ENSBTAG00000005620 | ortholog_one2one | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000005402 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005328 | ortholog_one2many | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015424 | ortholog_one2many | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000004665 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000002974 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000013915 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000015500 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000011942 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000149273 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006519 | ortholog_one2many | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000004297 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000011581 | ortholog_one2many | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000004079 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000009019 | ortholog_one2one | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000006945 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009197 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000030744 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026915 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000022412 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000003688 | ortholog_one2one | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000011271 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017418 | ortholog_one2many | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011198 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000014855 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000007053 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000005858 | ortholog_one2one | 5 retrogenes | |
| Vicugna pacos | ENSVPAG00000011615 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_999 | 74.59 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_1180 | 81.93 | 67.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_1354 | 87.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_1559 | 75.86 | 70.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ogar_1574 | 90.98 | 99.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ogar_2577 | 66.47 | 67.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ogar_2786 | 90.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000005318 retrocopies