RetrogeneDB ID: | retro_meug_399 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold109610:232..673(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3 | ||
Ensembl ID: | ENSMEUG00000011581 | ||
Aliases: | None | ||
Description: | ribosomal protein S3 [Source:HGNC Symbol;Acc:10420] |
Percent Identity: | 82.31 % |
Parental protein coverage: | 60.49 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSM |
..SVE.Y..KVA.RGLCAIAQA..L.YKLLGGLAV.RACYGVL.FIMESG.KGCEVVVSGK..GQRAKSM | |
Retrocopy | DSSVEMYSKKVAIRGLCAIAQAKFLHYKLLGGLAVHRACYGVLHFIMESGTKGCEVVVSGKPGGQRAKSM |
Parental | KFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPT |
.FVDGLMIHSGDP.NYY.DT...HV.LRQGVLGIKVKIM.PWDPSGK.GPKKPLPDHVSI.E.KDE.LPT | |
Retrocopy | MFVDGLMIHSGDPINYYTDTVMCHVFLRQGVLGIKVKIMVPWDPSGKTGPKKPLPDHVSITESKDEMLPT |
Parental | TPISEQK |
TPISEQK | |
Retrocopy | TPISEQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |