RetrogeneDB - Parental gene ENSOGAG00000013246 details

							
>ENSOGAG00000013246
AAGGGGTTTGTTAAGGTTGTCAAGAATAAGGCCTACTTTAAGAGGTACCAAGTGAAATTTAGAAGACGACGAGAGGGTAA

AACTGATTACTATGCTCGGAAACGCTTGGTGATACAGGATAAAAATAAGTACAACACACCCAAATACAGAATGATAGTTC

GTGTGACTAACAGAGACATCATTTGTCAGATTGCTTATGCCCGCATAGAAGGGGATATGATAGTCTGCGCAGCTTATGCA

CATGAACTACCAAAATACGGTGTGAAGGTTGGCCTGACAAGGAATTGTCAAGCTTATGCATCAGGGTTATTGTTAGCCAA

AATGCTTCTCAATAGGTTTGGCATGGACAAGATCTATGAAGGCCAAGTGGAGGTGACTGGCGATGAATACAATGTGGAAA

GCATCGATGGCCAGCCTGGTGCTTTTACATGCTATTTGGATGCAGGCCTTGCCAGGACTACCACTGGCAATAAAGTTTTT

GGAGCCCTGAAGGGAGCTGTGGATGGAGGCTTGTCTATCCCTCACAGTACCAAACGATTCCCTGGTTATGATTCTGAAAG

CAAGGAATTTAATGCTGAAGTACATCGGAAGCATATCATGGGACAGAATGTTGCAGATTATATGCGTTACCTAATGGAAG

AAGATGAAGATGCTTACAAAAAACAGTTCTCTCAATACATAAAGAACAACGTCACTCCAGACATGATGGAGGAGATGTAT

AAGAAAGCTCATGCGGCTATACGAGATAACCCAGTCTATGAGAAGAAGCCCAAGAGAGAAGTTAAAAAGAAGAGATGGAA

CCGTCCCAAAATGTCCCTTGCCCAGAAGAAAGATCGGGTAGCTCAAAAGAAGGCAAGCTTCCTTAGAGCTCAGGAGCGGG

CTGCTGAAAGCTAA

Species	Parental gene accession	Homology type	Retrogenes number
Erinaceus europaeus	ENSEEUG00000002852	ortholog_one2one	1 retrogene	retro_eeur_620,
Echinops telfairi	ENSETEG00000009889	ortholog_one2one	8 retrogenes	retro_etel_1044, retro_etel_1089, retro_etel_1103, retro_etel_1264, retro_etel_2028, retro_etel_64, retro_etel_785, retro_etel_814,
Homo sapiens	ENSG00000122406	ortholog_one2one	30 retrogenes	retro_hsap_1266, retro_hsap_138, retro_hsap_1469, retro_hsap_1539, retro_hsap_1588, retro_hsap_1767, retro_hsap_183, retro_hsap_1989, retro_hsap_2143, retro_hsap_2385, retro_hsap_2594, retro_hsap_2600, retro_hsap_2777, retro_hsap_2962, retro_hsap_3105, retro_hsap_3178, retro_hsap_3181, retro_hsap_3209, retro_hsap_3430, retro_hsap_3520, retro_hsap_3941, retro_hsap_4048, retro_hsap_4104, retro_hsap_486, retro_hsap_590, retro_hsap_632, retro_hsap_646, retro_hsap_742, retro_hsap_780, retro_hsap_827,
Gorilla gorilla	ENSGGOG00000002699	ortholog_one2one	24 retrogenes	retro_ggor_1129, retro_ggor_1172, retro_ggor_1206, retro_ggor_1342, retro_ggor_1343, retro_ggor_1656, retro_ggor_1934, retro_ggor_2052, retro_ggor_2130, retro_ggor_2178, retro_ggor_2243, retro_ggor_2318, retro_ggor_233, retro_ggor_2380, retro_ggor_264, retro_ggor_2649, retro_ggor_2715, retro_ggor_2755, retro_ggor_457, retro_ggor_521, retro_ggor_553, retro_ggor_622, retro_ggor_647, retro_ggor_996,
Macropus eugenii	ENSMEUG00000006361	ortholog_one2many	3 retrogenes	retro_meug_1168, retro_meug_1537, retro_meug_2146,
Myotis lucifugus	ENSMLUG00000008956	possible_ortholog	1 retrogene	retro_mluc_925,
Monodelphis domestica	ENSMODG00000011635	ortholog_one2many	1 retrogene	retro_mdom_748,
Nomascus leucogenys	ENSNLEG00000010500	ortholog_one2many	2 retrogenes	retro_nleu_2102, retro_nleu_39,
Ornithorhynchus anatinus	ENSOANG00000004669	ortholog_many2many	1 retrogene	retro_oana_97,
Petromyzon marinus	ENSPMAG00000002040	ortholog_one2many	1 retrogene	retro_pmar_23,
Pongo abelii	ENSPPYG00000001152	ortholog_one2many	32 retrogenes	retro_pabe_1053, retro_pabe_1219, retro_pabe_1274, retro_pabe_1307, retro_pabe_1331, retro_pabe_1501, retro_pabe_1918, retro_pabe_1931, retro_pabe_2019, retro_pabe_2123, retro_pabe_2238, retro_pabe_2457, retro_pabe_246, retro_pabe_247, retro_pabe_2640, retro_pabe_2641, retro_pabe_2658, retro_pabe_2813, retro_pabe_2841, retro_pabe_2909, retro_pabe_3247, retro_pabe_3320, retro_pabe_3360, retro_pabe_3534, retro_pabe_446, retro_pabe_447, retro_pabe_480, retro_pabe_51, retro_pabe_562, retro_pabe_572, retro_pabe_637, retro_pabe_740,
Pan troglodytes	ENSPTRG00000000963	ortholog_one2one	30 retrogenes	retro_ptro_1038, retro_ptro_1068, retro_ptro_1184, retro_ptro_1326, retro_ptro_139, retro_ptro_1519, retro_ptro_1524, retro_ptro_1568, retro_ptro_169, retro_ptro_1744, retro_ptro_1878, retro_ptro_2005, retro_ptro_2241, retro_ptro_2262, retro_ptro_2264, retro_ptro_2329, retro_ptro_2391, retro_ptro_2674, retro_ptro_2742, retro_ptro_2785, retro_ptro_2941, retro_ptro_3027, retro_ptro_366, retro_ptro_433, retro_ptro_460, retro_ptro_470, retro_ptro_528, retro_ptro_577, retro_ptro_866, retro_ptro_997,
Sarcophilus harrisii	ENSSHAG00000006417	ortholog_one2many	1 retrogene	retro_shar_202,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_ogar_134	90.20	99.66	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_ogar_707	66.67	58.25	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_ogar_1164	91.55	99.66	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_ogar_1627	81.61	99.66	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_ogar_2374	79.93	99.66	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_ogar_2633	67.40	60.27	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSOGAG00000013246 retrocopies

Parental gene:	RPL5, ENSOGAG00000013246
Aliases:	None
Description:	ribosomal protein L5 [Source:HGNC Symbol;Acc:10360]
Organism:	*Bushbaby (Otolemur garnettii)*
Coordinates:	GL873529.1:16235633..16248079(-)

Parental gene:

RPL5, ENSOGAG00000013246