Parental gene: | VRK1, ENSOGAG00000016785 |
| Aliases: | None |
| Description: | vaccinia related kinase 1 [Source:HGNC Symbol;Acc:12718] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873539.1:22757430..22786680(+) |
>ENSOGAG00000016785
ATGCCTCGTGTAAAAGCAGCTCAAGCTGGAAGACAGGGCCCTGCGAAAAGACATCTTGCAGAACAGTTTGCAGCTGGGGA
GGTAGTGACTGACATGGGAAAAAAAGAATGGAAAGTAGGATTACCCATTGGCCAGGGTGGCTTTGGCTGTATATATCTTG
CTGATACAAATTCTTCAAAATCGGTTGGCAGTGATGCACCCTGTGTTGTAAAAGTGGAACCCAGTGACAATGGACCTCTT
TTTACTGAATTAAAGTTCTACCAGCGAGCTGCTAAACCAGAGCAAATTCAGAAATGGATTCGTACCCATAAACTGAAGTA
CCTGGGTGTTCCTAAGTATTGGGGGTCTGGTCTTCATGATAAAAATGGAAAAAGTTATAGGTTTATGATAATGGATCGCT
TTGGGAGTGACCTTCAGAAAATATATGAAGCAAATGCCAAAAGGTTCTCTCGGAAAAGTGTCTTGCAACTAGGCTTAAGA
ATTCTGGATGTTCTTGAATATATTCACGAGCATGAGTATGTACATGGAGATATCAAGGCCTCAAATCTTCTTCTGAGCTA
CAAGAATCCTGACCAGGTGTACTTGGTAGATTATGGCCTTGCTTATCGGTACTGCCCTGATGGAGTTCATAAAGAATACA
AAGAAGACCCCAAAAGATGTCATGATGGCACCATTGAATTCACCAGCATTGATGCACACAATGGCGTGGTTGTAGCCCCA
TCACGACGTGGTGATTTGGAAATACTTGGTTATTGCATGATCCAGTGGCTGACTGGCCATCTTCCGTGGGAGGATAATTT
GAAAGATCCTAGATATGTTAGAGATTCCAAAATTAGATATAGAGAAAATATTGCAAGTTTGATGGAAAAGTGTTTTCCTG
AGAAAAACAAACCAGGTGAAATCGCCAAATACATGGAAACAGTGAAATTACTGGGCTATACTGACAAACCTCTTTATCAA
AATTTACGAGATATTCTTTCACAAGGACTGAAAGCTATAGGAAGTAAAGATGATGGCAAACTAGACCTCACTGTTGTAGA
GAATGGAGGTCTGAAAGCAAAAACAATAACAAAG
ATGCCTCGTGTAAAAGCAGCTCAAGCTGGAAGACAGGGCCCTGCGAAAAGACATCTTGCAGAACAGTTTGCAGCTGGGGA
GGTAGTGACTGACATGGGAAAAAAAGAATGGAAAGTAGGATTACCCATTGGCCAGGGTGGCTTTGGCTGTATATATCTTG
CTGATACAAATTCTTCAAAATCGGTTGGCAGTGATGCACCCTGTGTTGTAAAAGTGGAACCCAGTGACAATGGACCTCTT
TTTACTGAATTAAAGTTCTACCAGCGAGCTGCTAAACCAGAGCAAATTCAGAAATGGATTCGTACCCATAAACTGAAGTA
CCTGGGTGTTCCTAAGTATTGGGGGTCTGGTCTTCATGATAAAAATGGAAAAAGTTATAGGTTTATGATAATGGATCGCT
TTGGGAGTGACCTTCAGAAAATATATGAAGCAAATGCCAAAAGGTTCTCTCGGAAAAGTGTCTTGCAACTAGGCTTAAGA
ATTCTGGATGTTCTTGAATATATTCACGAGCATGAGTATGTACATGGAGATATCAAGGCCTCAAATCTTCTTCTGAGCTA
CAAGAATCCTGACCAGGTGTACTTGGTAGATTATGGCCTTGCTTATCGGTACTGCCCTGATGGAGTTCATAAAGAATACA
AAGAAGACCCCAAAAGATGTCATGATGGCACCATTGAATTCACCAGCATTGATGCACACAATGGCGTGGTTGTAGCCCCA
TCACGACGTGGTGATTTGGAAATACTTGGTTATTGCATGATCCAGTGGCTGACTGGCCATCTTCCGTGGGAGGATAATTT
GAAAGATCCTAGATATGTTAGAGATTCCAAAATTAGATATAGAGAAAATATTGCAAGTTTGATGGAAAAGTGTTTTCCTG
AGAAAAACAAACCAGGTGAAATCGCCAAATACATGGAAACAGTGAAATTACTGGGCTATACTGACAAACCTCTTTATCAA
AATTTACGAGATATTCTTTCACAAGGACTGAAAGCTATAGGAAGTAAAGATGATGGCAAACTAGACCTCACTGTTGTAGA
GAATGGAGGTCTGAAAGCAAAAACAATAACAAAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Danio rerio | ENSDARG00000018006 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012543 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003253 | other_paralog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008746 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011587 | other_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014866 | other_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016063 | within_species_paralog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011492 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_2000 | 92.19 | 70.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000016785 retrocopies