Parental gene:

ENSOGAG00000025948

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873550.1:4937727..4939267(-)


>ENSOGAG00000025948
GAGGAGGACCATGATTCAAAGGAACCAGAGCAGTTGAGAAAACTGTTTATTGGTGGTCTGAGCTTTGAAACTACAGATGA
TAGTTTAAGAGAACATTTTGAGTGGGGCACACTCACTGATTGTGTGGTAATGAGAGATCCCCAAAGAAAACATTCCAGGG
GCTTTGGTTTTGTGACTTACTCTTGTGTGGAACCACACAAGGCTGATGGGCGTGTTGTGGAACCAAAGAGAGCTGTTTCT
AGAGAGGATTCTGTAAAGCCTGGGGCCCATCTCACAGTGAAGAAAATTTTTGTTGGCAGCATTAAAGAAGATACAGAAGA
ATATCATTTGAGAGACTACTTTGAAAAGTATGGCAAGATTAAAACCATAGAAGTTGTGGAAGACAGGCAGAGTGGAAAAA
AGAGAGGATTTGCTTTTGCAACTTTTGATGATCATGATACTGTTGATAAAATTGTTGTTCAGAAATCCCACACTATTAAT
GGGCATAATTGTGAAGTGAAAAAGGCCCTTTCTAAACAAGAGATGCAGTCTGCTGGATTGCAAAGAGGTCATGAAGGTGG
ATCTGGCAACTTTATGGGTTGGGGAGGAAACTTTGGAGGTGGTGGAGGTAATTTTGACCGTGGTGGAAACCTTGGTGGAA
GAGGAGGATATGGTGGTGGAGGTGGTGGCAGCAGAGGTAGTTATGGAGGAGGCGATGGTGGATACAATGGATTTGGAGGA
GATGGTGGGAACTATGGCAGTGGTCCTGGTTACAGTAGTAGAGGGGGCTATGGTGGTGGTGGACCAGGATATGGAAACCA
AGGTGGTGGATATGGTGGTGGAGGAGGATATGAGGGTTACAATGAAGGAGGAAGTTTTGGAGGTAACTATGGTGGTAGTG
GGAACTATAATGATTTTGGAAATTATAGTGGACAACAGCAATCAAATTATGGACCCATGAAAGGGGGCAGTTTTGGTGGA
AGAAGCTTGGGCAGTCCATATGGTGGTGGTTATGGATCTGGTGGTGGAATTGGTGGATATGGTAGCAGAAGGTTCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011920 possible_ortholog 4 retrogenes
retro_amel_1407, retro_amel_557, retro_amel_715, retro_amel_765,
Ficedula albicollis ENSFALG00000003215 ortholog_one2many 1 retrogene
retro_falb_15,
Gallus gallus ENSGALG00000009250 ortholog_one2many 1 retrogene
retro_ggal_10,
Monodelphis domestica ENSMODG00000019803 possible_ortholog 1 retrogene
retro_mdom_1590,
Oryctolagus cuniculus ENSOCUG00000002743 possible_ortholog 2 retrogenes
retro_ocun_994, retro_ocun_995,
Otolemur garnettii ENSOGAG00000002501 other_paralog 4 retrogenes
retro_ogar_2717, retro_ogar_2791, retro_ogar_437, retro_ogar_693,
Otolemur garnettii ENSOGAG00000015353 other_paralog 3 retrogenes
retro_ogar_1384, retro_ogar_3077, retro_ogar_3189,
Otolemur garnettii ENSOGAG00000028132 within_species_paralog 7 retrogenes
retro_ogar_1869, retro_ogar_1924, retro_ogar_2222, retro_ogar_2590, retro_ogar_3215, retro_ogar_600, retro_ogar_814,
Otolemur garnettii ENSOGAG00000029707 within_species_paralog 3 retrogenes
retro_ogar_1721, retro_ogar_205, retro_ogar_2321,
Otolemur garnettii ENSOGAG00000030251 other_paralog 2 retrogenes
retro_ogar_3509, retro_ogar_385,
Pelodiscus sinensis ENSPSIG00000003011 ortholog_one2many 1 retrogene
retro_psin_16,
Sarcophilus harrisii ENSSHAG00000018255 possible_ortholog 1 retrogene
retro_shar_518,
Tarsius syrichta ENSTSYG00000012949 possible_ortholog 2 retrogenes
retro_tsyr_1480, retro_tsyr_2122,
Xenopus tropicalis ENSXETG00000001806 ortholog_one2many 1 retrogene
retro_xtro_11,
Xiphophorus maculatus ENSXMAG00000000439 ortholog_one2many 1 retrogene
retro_xmac_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1685 80.70 82.32
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2. retro_ogar_3010 77.97 82.32
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3. retro_ogar_3175 85.56 82.32
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Download FASTA sequences of all ENSOGAG00000025948 retrocopies