Parental gene:

RPS7, ENSOPRG00000005085

Aliases:None
Description:ribosomal protein S7 [Source:HGNC Symbol;Acc:10440]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_4071:33197..37344(+)


>ENSOPRG00000005085
ATGTTTAGCTCGAGCGCCAAGATCGTCAAGCCGAACGGCGAGAAGCCGGATGAGTTCGAGTCGGGCATCTCGCAGGCCCT
ACTGGAGCTGGAGATGAACTCGGACCTCAAGGCCCAGCTGAGGGAGCTGAACATCACGGCCGCCAAGGAAATCGAAGTCG
GGGGCGGCCGAAAAGCGATCATCATCTTCGTGCCCGTCCCTCAGCTAAAATCTGTCCAGAAAACCCAAGTCAGGCTAGTG
CGCGAGCTGGAGAAAAAGTTAAGTGGGAAGGTCTTCATGGCTCAGAGGAGAATTCTGCCCAAGCCCACCCGGAAGAGCCG
CACGAAGAACAAGCAGAAGCGGCCCAGGAGCCGCACGCTGACGGCGGTGCACGACGCCATCCTGGAAGACCTGGTGTTCC
CCAGTGAAATCGTGGGCAAGAGGATCCGCGTGAAGCTGGACGGCAGCCGCCTCATCAAGGTCCACCTGGACAAAGCCCAG
CAGAACAACGTGGAGCACAAGGTGGAAACTTTCTCTGGTGTGTATAAGAAGCTCACAGGCAAGGATGTTAATTTTGAGTT
TCCAGAGTTCCAGTTGTAA

Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000023243 ortholog_one2many 2 retrogenes
retro_fcat_1534, retro_fcat_41,
Macaca mulatta ENSMMUG00000011870 possible_ortholog 7 retrogenes
retro_mmul_1831, retro_mmul_1846, retro_mmul_1929, retro_mmul_23, retro_mmul_2403, retro_mmul_2540, retro_mmul_357,
Monodelphis domestica ENSMODG00000014495 ortholog_one2one 2 retrogenes
retro_mdom_662, retro_mdom_810,
Mus musculus ENSMUSG00000061477 possible_ortholog 2 retrogenes
retro_mmus_271, retro_mmus_53,
Oryctolagus cuniculus ENSOCUG00000008507 possible_ortholog 2 retrogenes
retro_ocun_203, retro_ocun_230,
Pongo abelii ENSPPYG00000025872 possible_ortholog 12 retrogenes
retro_pabe_1033, retro_pabe_1555, retro_pabe_2506, retro_pabe_2982, retro_pabe_2983, retro_pabe_31, retro_pabe_313, retro_pabe_360, retro_pabe_3659, retro_pabe_3803, retro_pabe_499, retro_pabe_524,
Rattus norvegicus ENSRNOG00000008551 possible_ortholog 2 retrogenes
retro_rnor_39, retro_rnor_391,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_415 56.31 52.60
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2. retro_opri_500 58.86 88.54
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3. retro_opri_1036 52.13 95.31
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Download FASTA sequences of all ENSOPRG00000005085 retrocopies