Parental gene:

RPS7, ENSMODG00000014495

Aliases:None
Description:ribosomal protein S7 [Source:HGNC Symbol;Acc:10440]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:539499515..539510134(-)


>ENSMODG00000014495
ATGTTCAGTTCCAGCGCCAAGATCGTGAAGCCCAATGGCGAGAAGCCAGACGAGTTCGAGTCTGGCATTTCCCAGGCTCT
ATTGGAGTTGGAGATGAACTCTGATTTAAAGGCTCAATTAAGAGAGCTGAATATCACAGCAGCTAAGGAAATTGAAGTTG
GTGGTGGCAGAAAAGCTATCATCATTTTTGTTCCAGTTCCTCAGCTAAAATCCTTTCAGAAGATCCAAGTACGACTAGTT
CGTGAATTGGAAAAAAAATTCAGTGGCAAACATGTGGTCTTCATTGCTCAGAGGAGAATTCTTCCTAAGCCAACAAGAAA
AAGCCGTACAAAAAATAAGCAAAAGCGTCCAAGAAGCCGAACTTTGACTGCTGTGCATGATGCAATCCTTGAAGACCTGG
TCTTTCCAAGTGAAATTGTTGGCAAGAGAATCCGTGTGAAACTAGATGGCAGCAGACTCATAAAAGTCCATTTGGATAAA
GCACAGCAGAACAATGTGGAGCACAAGGTAGAAACATTTTCTGGCGTTTATAAGAAGCTGACAGGCAAAGATGTTAATTT
TGAATTCCCAGAGTTCCAGCTGTAA

Library Parental gene expression (RPM)
SRP007412_brain 458 .31 RPM
SRP007412_cerebellum 217 .75 RPM
SRP007412_heart 577 .52 RPM
SRP007412_kidney 1131 .16 RPM
SRP007412_liver 1676 .62 RPM
SRP007412_testis 336 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016462 ortholog_one2many 2 retrogenes
retro_cjac_16, retro_cjac_2287,
Felis catus ENSFCAG00000023243 ortholog_one2many 2 retrogenes
retro_fcat_1534, retro_fcat_41,
Homo sapiens ENSG00000171863 ortholog_one2one 14 retrogenes
retro_hsap_111, retro_hsap_112, retro_hsap_1242, retro_hsap_1737, retro_hsap_1837, retro_hsap_2907, retro_hsap_2925, retro_hsap_329, retro_hsap_3635, retro_hsap_404, retro_hsap_4711, retro_hsap_4760, retro_hsap_528, retro_hsap_703,
Gorilla gorilla ENSGGOG00000023095 ortholog_one2many 13 retrogenes
retro_ggor_2028, retro_ggor_2090, retro_ggor_2161, retro_ggor_218, retro_ggor_2452, retro_ggor_2927, retro_ggor_294, retro_ggor_2965, retro_ggor_3047, retro_ggor_346, retro_ggor_400, retro_ggor_484, retro_ggor_597,
Loxodonta africana ENSLAFG00000015087 ortholog_one2many 11 retrogenes
retro_lafr_1223, retro_lafr_160, retro_lafr_217, retro_lafr_318, retro_lafr_319, retro_lafr_413, retro_lafr_514, retro_lafr_720, retro_lafr_786, retro_lafr_964, retro_lafr_970,
Myotis lucifugus ENSMLUG00000006121 ortholog_one2many 1 retrogene
retro_mluc_1118,
Macaca mulatta ENSMMUG00000011870 possible_ortholog 7 retrogenes
retro_mmul_1831, retro_mmul_1846, retro_mmul_1929, retro_mmul_23, retro_mmul_2403, retro_mmul_2540, retro_mmul_357,
Mus musculus ENSMUSG00000061477 possible_ortholog 2 retrogenes
retro_mmus_271, retro_mmus_53,
Oryctolagus cuniculus ENSOCUG00000008507 possible_ortholog 2 retrogenes
retro_ocun_203, retro_ocun_230,
Otolemur garnettii ENSOGAG00000028165 ortholog_one2many 1 retrogene
retro_ogar_133,
Ochotona princeps ENSOPRG00000005085 ortholog_one2one 3 retrogenes
retro_opri_1036, retro_opri_415, retro_opri_500,
Pongo abelii ENSPPYG00000025872 possible_ortholog 12 retrogenes
retro_pabe_1033, retro_pabe_1555, retro_pabe_2506, retro_pabe_2982, retro_pabe_2983, retro_pabe_31, retro_pabe_313, retro_pabe_360, retro_pabe_3659, retro_pabe_3803, retro_pabe_499, retro_pabe_524,
Pan troglodytes ENSPTRG00000011615 ortholog_one2many 3 retrogenes
retro_ptro_202, retro_ptro_3132, retro_ptro_58,
Pteropus vampyrus ENSPVAG00000002071 ortholog_one2many 7 retrogenes
retro_pvam_1051, retro_pvam_1183, retro_pvam_1330, retro_pvam_1437, retro_pvam_207, retro_pvam_543, retro_pvam_887,
Rattus norvegicus ENSRNOG00000008551 possible_ortholog 2 retrogenes
retro_rnor_39, retro_rnor_391,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_662 56.29 76.80
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2. retro_mdom_810 54.43 79.38
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Download FASTA sequences of all ENSMODG00000014495 retrocopies