Parental gene: | SEPHS1, ENSOPRG00000006587 |
| Aliases: | None |
| Description: | selenophosphate synthetase 1 [Source:HGNC Symbol;Acc:19685] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1674:270404..283353(-) |
>ENSOPRG00000006587
ATTGGAATGGATACTTGTGTCATTCCTTTGAGACATGGTGGACTCTCCTTGGTTCAGACCACGGATTACATTTATCCTAT
CGTAGATGACCCTTACATGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGGGATAAAGTGATCCCCCTAATTATA
CAGGGCTTTAAAGATGCAGCAGAGGAAGCAGGAACGTCGGTAACAGGTGGCCAGACGGTATTAAACCCCTGGATCGTTTT
GGGAGGAGTCGCTACAACTGTCTGCCAGCCCAATGAATTTATCATGCCAGATAATGCAGTGCCAGGAGACGTGTTGGTGT
TAACGAAACCCCTGGGGACACAAGTTGCTGTCGCCGTGCATCAGTGGCTGGACATTCCTGAAAAATGGAATAAAATTAAA
TTAGTGGTCACCCAAGAAGATGTGGAGCTGGCTTATCAGGAAGCAATGATGAATATGGCCAGGCTCAACAGAACAGCTGC
AGGGCTCATGCACACATTCAACGCCCATGCTGCCACAGACATCACCGGCTTCGGGATTTTGGGCCACGCACAGAACCTAG
CCAAGCAGCAGAGGAACGAGGTGTCATTTGTGATTCACAACCTTCCTGTGCTGGCTAAGATGGCTGCCGTGAGCAAGGCC
TGTGGAAACATGTTTGGCCTCATGCATGGGACCTGCCCGGAGACCTCAGGAGGCCTTCTAATCTGTTTACCACGTGAGCA
AGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGAAGGTCACCAAGCATGGATTATTGGGATTGTAGAGA
AGGGCAACCGTACCGCCAGGATCATAGACAAACCCCGGATCATCGAAGTCGCACCACAAGTGGCCACTCAGAACGTGAAC
CCCACACCCGGTGCCACCTCTTAA
ATTGGAATGGATACTTGTGTCATTCCTTTGAGACATGGTGGACTCTCCTTGGTTCAGACCACGGATTACATTTATCCTAT
CGTAGATGACCCTTACATGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGGGATAAAGTGATCCCCCTAATTATA
CAGGGCTTTAAAGATGCAGCAGAGGAAGCAGGAACGTCGGTAACAGGTGGCCAGACGGTATTAAACCCCTGGATCGTTTT
GGGAGGAGTCGCTACAACTGTCTGCCAGCCCAATGAATTTATCATGCCAGATAATGCAGTGCCAGGAGACGTGTTGGTGT
TAACGAAACCCCTGGGGACACAAGTTGCTGTCGCCGTGCATCAGTGGCTGGACATTCCTGAAAAATGGAATAAAATTAAA
TTAGTGGTCACCCAAGAAGATGTGGAGCTGGCTTATCAGGAAGCAATGATGAATATGGCCAGGCTCAACAGAACAGCTGC
AGGGCTCATGCACACATTCAACGCCCATGCTGCCACAGACATCACCGGCTTCGGGATTTTGGGCCACGCACAGAACCTAG
CCAAGCAGCAGAGGAACGAGGTGTCATTTGTGATTCACAACCTTCCTGTGCTGGCTAAGATGGCTGCCGTGAGCAAGGCC
TGTGGAAACATGTTTGGCCTCATGCATGGGACCTGCCCGGAGACCTCAGGAGGCCTTCTAATCTGTTTACCACGTGAGCA
AGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGAAGGTCACCAAGCATGGATTATTGGGATTGTAGAGA
AGGGCAACCGTACCGCCAGGATCATAGACAAACCCCGGATCATCGAAGTCGCACCACAAGTGGCCACTCAGAACGTGAAC
CCCACACCCGGTGCCACCTCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009494 | ortholog_one2many | 2 retrogenes | |
| Equus caballus | ENSECAG00000014281 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012205 | possible_ortholog | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018125 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_271 | 83.13 | 74.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_655 | 88.33 | 78.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_670 | 83.13 | 74.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000006587 retrocopies