Parental gene:

SEPHS1, ENSECAG00000014281

Aliases:None
Description:selenophosphate synthetase 1 [Source:RefSeq peptide;Acc:NP_001177348]
Organism:Horse (Equus caballus)
Coordinates:29:21426847..21451230(+)


>ENSECAG00000014281
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTATGAATTGGACAAGAGCTTCCGGCTAACCAGATTCACGGAACTGAA
GGGCACCGGCTGCAAAGTGCCCCAAGATGTCCTGCAGAAATTGCTGGAGTCCTTGCAAGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCAGTTATGCCAAGGCTCGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCATGGCGGCCTG
TCCTTGGTTCAAACCACGGATTACATTTATCCCATCGTCGATGACCCTTACATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGTGACCTCTACGCAATGGGGGTCACAGAATGTGACAATATGCTGATGCTTCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCCCTAATTATACAGGGTTTTAAAGATGCAGCAGAGGAGGCGGGAACGTCTGTGACG
GGCGGCCAAACAGTGTTAAACCCCTGGATTGTTCTGGGAGGAGTGGCTACGACTGTCTGCCAGCCCAATGAATTTATCAT
GCCAGATAACGCAGTGCCGGGGGACGTCCTGGTGTTGACGAAGCCCTTGGGGACACAAGTGGCCGTGGCGGTGCACCAGT
GGCTGGATATTCCTGAAAAATGGAATAAAATTAAACTAGTGGTCACCCAAGAAGATGTGGAGTTGGCGTACCAGGAGGCG
ATGATGAACATGGCCAGGCTCAACAGAACAGCTGCAGGACTCATGCACACATTCAATGCCCACGCTGCCACGGACATCAC
GGGCTTTGGAATTTTGGGCCATGCTCAGAACCTGGCCAAGCAACAGAGGAATGAGGTGTCCTTTGTGATTCACAACCTTC
CCGTCCTGGCCAAGATGGCTGCTGTGAGCAAGGCCTGTGGAAACATGTTTGGCCTCATGCATGGGACCTGCCCGGAGACA
TCAGGAGGCCTTCTAATCTGTTTACCACGTGAGCAAGCAGCTCGGTTTTGTGCAGAGATAAAGTCCCCCAAATATGGTGA
AGGTCACCAAGCCTGGATTATTGGGATCGTAGAGAAGGGCAACCGGACGGCCAGGATCATAGACAAACCTCGGATCATCG
AAGTCGCCCCACAAGTGGCCACTCAGAGTGTGAACCCCACACCTGGGGCCACCTCGTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 31 .70 RPM
SRP021940_cerebellum 48 .56 RPM
SRP021940_embryo 72 .32 RPM
SRP021940_placental_villous 15 .83 RPM
SRP021940_synovial_membrane 31 .05 RPM
SRP021940_testis 26 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009494 ortholog_one2many 2 retrogenes
retro_cjac_166, retro_cjac_2219,
Dipodomys ordii ENSDORG00000014119 ortholog_one2one 1 retrogene
retro_dord_792,
Homo sapiens ENSG00000086475 ortholog_one2one 3 retrogenes
retro_hsap_2196, retro_hsap_3860, retro_hsap_4705,
Macaca mulatta ENSMMUG00000021233 ortholog_one2one 4 retrogenes
retro_mmul_1607, retro_mmul_2495, retro_mmul_2647, retro_mmul_922,
Mus musculus ENSMUSG00000026662 ortholog_one2one 1 retrogene
retro_mmus_248,
Nomascus leucogenys ENSNLEG00000012205 ortholog_one2many 7 retrogenes
retro_nleu_1868, retro_nleu_2211, retro_nleu_234, retro_nleu_2668, retro_nleu_2873, retro_nleu_3004, retro_nleu_327,
Otolemur garnettii ENSOGAG00000007807 ortholog_one2one 1 retrogene
retro_ogar_3026,
Ochotona princeps ENSOPRG00000006587 ortholog_one2one 3 retrogenes
retro_opri_271, retro_opri_655, retro_opri_670,
Pan troglodytes ENSPTRG00000002303 ortholog_one2one 3 retrogenes
retro_ptro_1135, retro_ptro_1669, retro_ptro_3126,
Rattus norvegicus ENSRNOG00000018125 ortholog_one2many 1 retrogene
retro_rnor_59,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_77 83.12 80.10
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000014281 retrocopies