Parental gene:

SNW1, ENSOPRG00000007568

Aliases:None
Description:SNW domain containing 1 [Source:HGNC Symbol;Acc:16696]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_762:224190..244190(-)


>ENSOPRG00000007568
ATGGCGCTCACCAGCTTTTTACCTGCACCTACCCAGCTCTCTCAGGACCAGCTTGAGGCTGAAGAGAAGGCAAGATCCCA
GAGATCGAGGCAGACCTCACTGGTGTCGTCTCGAAGAGAGCCGCCCCCTTACGGGTACCGGAAAGGCTGGATACCTCGGC
TCTTAGAGGATTTTGGAGATGGAGGTGCTTTTCCAGAGATCCATGTGGCTCAATATCCACTGGATATGGGACGCAAGAAA
AAAATGTCAAATGCACTGGCCATTCAGGTAGATCCTGAAGGAAAAATTAAATATGATGCGATTGCTCGACAAGGACAGTC
AAAAGACAAGGTCATTTACAGTAAATACTCTGACCTGGTTCCGAAGGAGGTTATGAATGCTGATGATCCCGACCTGCAAC
GGCCCGACGAAGAAGCCATTAAAGAGATAACAGAGAAGACACGAGTAGCCTTGGAAAAGTCCGTATCACAGAAGGTTGCT
GCAGCCATGCCAGTTCGAGCTGCGGATAAACTGGCCCCTGCCCAGTATATCCGATACACACCATCTCAGCAAGGTGTGGC
TTTCAACTCTGGAGCCAAACAGAGGGTGATTCGGATGGTAGAAATGCAGAAAGATCCAATGGAACCTCCGAGGTTCAAGA
TTAATAAGAAAATTCCTCGGGGACCACCTTCTCCTCCTGCTCCCGTCATGCATTCTCCTAGCCGAAAGATGACTGTAAAG
GAACAACAAGAGTGGAAGATTCCTCCTTGTATTTCCAATTGGAAAAATGCCAAGGGTTATACAATTCCGTTGGACAAACG
TCTGGCTGCTGATGGGAGGGGTCTGCAGACAGTACACATCAATGAAAACTTTGCAAAATTGGCTGAAGCCCTCTACATTG
CTGATCGGAAGGCTCGTGAAGCTGTGGAGACACGTGCTCAAGTAGAGAGAAAGATGGCACAAAAAGAAAAGGAGAAACAC
GAAGAAAAACTAAGAGAGATGGCCCAGAAAGCCAGGGAGAGGAGAGCTGGGATCAAAACCCATGTGGAAAAAGAGGATGG
GGAGGCACGTGAGCGGGATGAAATCCGGCACGACAGACGAAAGGAGAGGCAGCACGACCGCAACCTGTCCAGGGCAGCTC
CTGACAAGAGGTCAAAACTACAGAGAAATGAAAATCGGGACATCAGTGAGGTCATTGCTCTTGGTGTGCCCAATCCTCGG
ACTTCCAATGAAGTTCAGTATGACCAAAGACTCTTCAACCAATCCAAGGGTATGGACAGTGGATTTGCAGGTGGAGAAGA
TGAAATTTACAATGTTTATGATCAAGCCTGGAGAGGCGGTAAAGATATGGCCCAGAGTATTTACAGGCCCAGTAAGAATC
TGGACAAGGACATGTATGGTGATGACCTAGAATCCAAAATAAAGACCAACAGATTTGTTCCCGACAAGGAGTTTTCTGGT
TCGGACCGTAGGCAGAGAGGCCGAGAAGGACCAGTTCAATTTGAGGAAGATCCTTTTGGTTTGGACAAATTTTTGGAAGA
GGCCAAACAGCACGGTGGCTCCAAAAGACCTTCAGACAGCAGCCGCCCCAAGGAGCACGAACATGAAAGCAAGAAGAGGA
GAAAGGAGTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003976 ortholog_one2one 2 retrogenes
retro_amel_163, retro_amel_912,
Canis familiaris ENSCAFG00000030409 ortholog_one2many 1 retrogene
retro_cfam_195,
Callithrix jacchus ENSCJAG00000016947 ortholog_one2one 2 retrogenes
retro_cjac_2932, retro_cjac_576,
Dipodomys ordii ENSDORG00000012380 ortholog_one2one 3 retrogenes
retro_dord_693, retro_dord_781, retro_dord_782,
Felis catus ENSFCAG00000001637 ortholog_one2one 1 retrogene
retro_fcat_635,
Homo sapiens ENSG00000100603 ortholog_one2one 1 retrogene
retro_hsap_174,
Gorilla gorilla ENSGGOG00000026016 ortholog_one2one 1 retrogene
retro_ggor_257,
Loxodonta africana ENSLAFG00000003482 ortholog_one2one 2 retrogenes
retro_lafr_474, retro_lafr_787,
Myotis lucifugus ENSMLUG00000005228 ortholog_one2many 2 retrogenes
retro_mluc_387, retro_mluc_805,
Monodelphis domestica ENSMODG00000005252 ortholog_one2one 1 retrogene
retro_mdom_1841,
Mustela putorius furo ENSMPUG00000008724 ortholog_one2one 1 retrogene
retro_mputfur_551,
Mus musculus ENSMUSG00000021039 ortholog_one2one 2 retrogenes
retro_mmus_1022, retro_mmus_387,
Nomascus leucogenys ENSNLEG00000016771 ortholog_one2one 1 retrogene
retro_nleu_982,
Pongo abelii ENSPPYG00000006031 ortholog_one2one 1 retrogene
retro_pabe_454,
Pan troglodytes ENSPTRG00000006587 ortholog_one2one 1 retrogene
retro_ptro_165,
Sorex araneus ENSSARG00000002279 ortholog_one2one 3 retrogenes
retro_sara_403, retro_sara_568, retro_sara_727,
Taeniopygia guttata ENSTGUG00000012340 ortholog_one2one 2 retrogenes
retro_tgut_15, retro_tgut_30,
Tarsius syrichta ENSTSYG00000010951 ortholog_one2one 1 retrogene
retro_tsyr_1871,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_737 62.62 55.78
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Download FASTA sequences of all ENSOPRG00000007568 retrocopies