Parental gene: | SNW1, ENSSARG00000002279 |
| Aliases: | None |
| Description: | SNW domain containing 1 [Source:HGNC Symbol;Acc:16696] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | GeneScaffold_2310:8056..51868(-) |
>ENSSARG00000002279
ATGGCGCTCACCAGCTTTTTACCTGCCCCAACTCAGCTATCTCAGGACCAGCTTGAGGCTGAAGAAAAGGCAAGATCCCA
GCGGTCACGACAGACCTCACTGGTCTCCTCCCGAAGAGAACCTCCACCATACGGGTACAGGAAAGGCTGGATACCTCGGT
TATTAGAGGATTTTGGAGATGGAGGTGCTTTTCCAGAGATCCATGTGGCCCAATATCCACTGGATATGGGACGGAAGAAA
AAAATGTCAAATGCACTGGCCATTCAGGTGGATGCTGAAGGAAAAATCAAATACGATGCGATCGCTCGACAGGGACAGTC
AAAAGACAAGGTCATTTATAGCAAGTACAGTGACCTGGTTCCCAAAGAAGTCATGAATGCAGATGACCCAGACCTACAAA
GACCCGATGAAGAAGCCATTAAAGAGATAACAGAAAAGACCAGAGTGGCCTTAGAGAAATCTGTGTCTCAGAAGGTGGCC
GCAGCCATGCCTGTCCGAGCGGCTGATAAGCTGGCTCCTGCTCAGTATATCCGATACACTCCATCTCAGCAAGGGGTGGC
TTTCAACTCTGGAGCTAAACAGAGGGTTATTCGAATGGTGGAAATGCAGAAAGATCCCATGGAGCCTCCAAGATTCAAAA
TTAATAAGAAAATTCCTCGGGGACCACCTTCTCCTCCCGCACCTGTGATGCATTCTCCTAGCCGGAAGATGACTGTTAAG
GAACAGCAAGAATGGAAGATTCCTCCTTGTATTTCAAACTGGAAAAACGCTAAGGGTTATACAATTCCATTAGACAAACG
CCTGGCTGCCGATGGAAGAGGACTGCAGACCGTTCACATCAATGAAAACTTTGCCAAGCTGGCTGAAGCTCTGTACATTG
CTGATCGGAAGAGGGAAAAACCCGAGAAACTGATAACCCAGAAAGTCAGGGATAGAGACACTGGGCTCCAAGATCNNNNN
NNNNNNNAGGACGGAGAGGCACGCGAGAGAGATGAAATCCGGCATGACAGGCGGAAAGAGAGACAGCATGACCGGAATCT
TTCCAGGGCAGCGCCTGATAAAAGGTCTAAACTTCAGAGAAACGAAAACCGAGATATCAGTGAAGTGATTGCACTTGGTG
TGCCCAACCCGCGGACTTCCAATGATGTTCAGTACGACCAGAGGCTCTTCAACCAAACCAAGGGTATGGACAGTGGTTTT
GCAGGAGGAGAAGATGAAATTTATAACGTTTATGATCAAGCATGGAGAGGTGGTAAAGATATGGCCCACAACATTTACAG
GCCCAGTAAAAATCTGGACAAGGATATGTATGGTGATGACCTCGAAGCCAGAATAAAGACCAACAGATTTGTTCCGGATA
AGGAGTTTTCTGGTTCAGATCGTAGGCAGCGAGGCCGAGAAGGACCAGTTCAGTTTGAGGAAGATCCCTTTGGTTTGGAC
AAGTTTTTGGAAGAAGCCAAACAGCACGGTGGCTCAAAAAGACCTTCAGATAGCAGCCGCCCCAAGGAACACGAGCACGA
AGGCAAGAAGAGACGAAAGGAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003976 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000030409 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016947 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000012380 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000001637 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000100603 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026016 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003482 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005228 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000005252 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008724 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021039 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000016771 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029825 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000007568 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006031 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006587 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014074 | ortholog_one2one | 3 retrogenes | |
| Taeniopygia guttata | ENSTGUG00000012340 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010951 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_403 | 77.33 | 57.78 | Please wait, loading  |
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| 2. | retro_sara_568 | 76.43 | 57.20 | Please wait, loading |
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| 3. | retro_sara_727 | 78.49 | 53.70 | Please wait, loading |
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Download FASTA sequences of all ENSSARG00000002279 retrocopies