Parental gene: | EIF4A1, ENSOPRG00000008591 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:3282] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_3384:22717..32516(+) |
>ENSOPRG00000008591
GTGTCATTGGCACAGATCAACAGATCCAGAGACAATGGCCCCGATGGGATGGAGCCCGAAGGTGTCATTGAGAGTAACTG
GAATGAGATCGTGGATAGCTTTGATGACATGAACCTCTCCGAGGCTCTGCTGCGCGGCATCTACGCCTATGGTTTCGAGA
AGCCCTCTGCCATCCAGCAGCGGGCCATTCTTCCTTGTATCAAGGGTTATGATGTGATCGCTCAAGCCCAATCTGGGACT
GGGAAAACGGCCACATTTGCCATATCGATTTTGCAGCAGATCGAGCTGGACCTGAAGGCCACCCAGGCCCTGGTCCTAGC
ACCCACTCGTGAACTGGCCCAGCAGATACAAAAGGTGGTCATGGCATTAGGAGATTACATGGGTGCATCCTGTCATGCCT
GCATTGGGACCAACGTGCGTGCTGAGGTGCAGAAACTGCAAATGGAAGCTCCCATCATTGTGACTCCTCGTGTATTCGAC
ATGCTTAACCGGAGATACCTGTCTCCCAAATATATCAAGATGTTTGTGCTGGATGAAGCTGATGAAATGTTAAGTCGTGG
ATTCAAGGACCAGATCTATGACATATTCCAAAAGCTCAACAGCAACACCCAGGTGGTCTTGTTGTCGGCTACCATGCCTT
CCGATGTGCTTGAAGTGACCAAGAAATTCATGAGGGACCCCATCCGGATTCTTGTCAAGAAGGAAGAATTGACCCTGGAG
ATCCGCCAGTTCTACATCAACGTAGAACGAGAGGAGTGGAAACTGGACACCCTGTGTGACTTATACGAAACCCTGACCAT
AACCCAGGCTGTCATCTTTATCAACACCCGAAGGAAGGTTGATTGGCTCACTGAGAAGATGCATGCCCGGGACTTCACAG
TCTCTGCCATGCACGGAGACATGGACCAGAAGGAACGAGATGTGATCATGAGGGAGTTCCGCTCAGGCTCCAGCCGAGTG
CTCATCACCACCGACCTGCTGGCCAGAGGCATTGATGTACAACAAGTTTCTTTAGTCATCAACTACGACCTTCCCACAAA
CAGGGAAAACTACATCCACAGAATTGGGCGTGGTGGACGATTTGGCCGTAAGGGTGTGGCCATTAATATGGTGACAGAGG
AAGACAAGAGGACTCTCCGAGACATTGAGACCTTCTACAACACTTCCATTGAGGAGATGCCCCTCAATGTTGCTGATCTC
ATCTGA
GTGTCATTGGCACAGATCAACAGATCCAGAGACAATGGCCCCGATGGGATGGAGCCCGAAGGTGTCATTGAGAGTAACTG
GAATGAGATCGTGGATAGCTTTGATGACATGAACCTCTCCGAGGCTCTGCTGCGCGGCATCTACGCCTATGGTTTCGAGA
AGCCCTCTGCCATCCAGCAGCGGGCCATTCTTCCTTGTATCAAGGGTTATGATGTGATCGCTCAAGCCCAATCTGGGACT
GGGAAAACGGCCACATTTGCCATATCGATTTTGCAGCAGATCGAGCTGGACCTGAAGGCCACCCAGGCCCTGGTCCTAGC
ACCCACTCGTGAACTGGCCCAGCAGATACAAAAGGTGGTCATGGCATTAGGAGATTACATGGGTGCATCCTGTCATGCCT
GCATTGGGACCAACGTGCGTGCTGAGGTGCAGAAACTGCAAATGGAAGCTCCCATCATTGTGACTCCTCGTGTATTCGAC
ATGCTTAACCGGAGATACCTGTCTCCCAAATATATCAAGATGTTTGTGCTGGATGAAGCTGATGAAATGTTAAGTCGTGG
ATTCAAGGACCAGATCTATGACATATTCCAAAAGCTCAACAGCAACACCCAGGTGGTCTTGTTGTCGGCTACCATGCCTT
CCGATGTGCTTGAAGTGACCAAGAAATTCATGAGGGACCCCATCCGGATTCTTGTCAAGAAGGAAGAATTGACCCTGGAG
ATCCGCCAGTTCTACATCAACGTAGAACGAGAGGAGTGGAAACTGGACACCCTGTGTGACTTATACGAAACCCTGACCAT
AACCCAGGCTGTCATCTTTATCAACACCCGAAGGAAGGTTGATTGGCTCACTGAGAAGATGCATGCCCGGGACTTCACAG
TCTCTGCCATGCACGGAGACATGGACCAGAAGGAACGAGATGTGATCATGAGGGAGTTCCGCTCAGGCTCCAGCCGAGTG
CTCATCACCACCGACCTGCTGGCCAGAGGCATTGATGTACAACAAGTTTCTTTAGTCATCAACTACGACCTTCCCACAAA
CAGGGAAAACTACATCCACAGAATTGGGCGTGGTGGACGATTTGGCCGTAAGGGTGTGGCCATTAATATGGTGACAGAGG
AAGACAAGAGGACTCTCCGAGACATTGAGACCTTCTACAACACTTCCATTGAGGAGATGCCCCTCAATGTTGCTGATCTC
ATCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016753 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015114 | ortholog_one2one | 8 retrogenes | |
| Dipodomys ordii | ENSDORG00000014225 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010780 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000014759 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003415 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000013499 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007090 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008132 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000004170 | within_species_paralog | 1 retrogene | |
| Sorex araneus | ENSSARG00000006017 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_155 | 76.17 | 72.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_985 | 76.17 | 72.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000008591 retrocopies