Parental gene:

rab11bb, ENSPMAG00000009335

Aliases:None
Description:RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
Organism:Lamprey (Petromyzon marinus)
Coordinates:GL479037:32890..36942(-)


>ENSPMAG00000009335
GTGGTGCTGATTGGAGACTCGGGCGTCGGTAAAAGCAACCTGCTTTCTCGCTTCACGCGCAACGAGTTCAACCTGGAGAG
CAAGAGCACCATTGGCGTGGAGTTCGCCACGCGCAGTATCCAGGTGGACGGCAAGACCATCAAGGCGCAGATCTGGGACA
CGGCCGGACAGGAGCGCTACCGCGCCATCACCTCCGCGTACTACCGTGGTGCGTACGGCGCACTGCTGGTGTACGACATC
GCAAAGCACCTGACGTACGAGAATGTGGAGCGCTGGCTCAAGGAGCTGCGCGACCACGCCGACAGCAACATCGTCATCAT
GCTCGTGGGCAACAAAAGCGACCTGCGGCACCTGAGGGCCGTCACCACCGATGAGGCCAAGGCCTTCGCAGAAAACCATG
GGCTCTCTTTCATTGAGACGTCTGCGTTAGACTCGACGAATGTGGAAAGTGCTTTCATCACCATCCTAACAGAAATCTAC
CGCACAGTTTCACAGCACCACATACCGGACGGCGGTGGCTCAAGCGGAAACCTGGCACGCAGCAGCGAGGTAAAGCTCAC
GTACCCGGACAAGTCTCCCGACGCCGGCAAGACGTCGCGCCTGCCGTGCTGCCAGAACCTGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018959 ortholog_one2many 1 retrogene
retro_btau_1850,
Choloepus hoffmanni ENSCHOG00000013525 ortholog_one2many 1 retrogene
retro_chof_1582,
Callithrix jacchus ENSCJAG00000007333 ortholog_one2many 1 retrogene
retro_cjac_1050,
Callithrix jacchus ENSCJAG00000010778 ortholog_one2many 2 retrogenes
retro_cjac_3866, retro_cjac_3917,
Erinaceus europaeus ENSEEUG00000009165 ortholog_one2one 2 retrogenes
retro_eeur_284, retro_eeur_565,
Echinops telfairi ENSETEG00000004920 ortholog_one2many 5 retrogenes
retro_etel_1150, retro_etel_2132, retro_etel_2214, retro_etel_694, retro_etel_837,
Homo sapiens ENSG00000103769 ortholog_one2many 1 retrogene
retro_hsap_715,
Gorilla gorilla ENSGGOG00000014252 ortholog_one2many 2 retrogenes
retro_ggor_538, retro_ggor_605,
Myotis lucifugus ENSMLUG00000008820 ortholog_one2many 2 retrogenes
retro_mluc_1606, retro_mluc_2435,
Macaca mulatta ENSMMUG00000008006 ortholog_one2many 1 retrogene
retro_mmul_2463,
Mus musculus ENSMUSG00000077450 ortholog_one2many 1 retrogene
retro_mmus_1846,
Nomascus leucogenys ENSNLEG00000012853 ortholog_one2many 1 retrogene
retro_nleu_467,
Otolemur garnettii ENSOGAG00000003227 ortholog_one2many 1 retrogene
retro_ogar_2405,
Pongo abelii ENSPPYG00000006573 ortholog_one2many 1 retrogene
retro_pabe_618,
Pan troglodytes ENSPTRG00000007188 ortholog_one2many 1 retrogene
retro_ptro_510,
Pteropus vampyrus ENSPVAG00000009645 ortholog_one2many 1 retrogene
retro_pvam_64,
Sarcophilus harrisii ENSSHAG00000006816 ortholog_one2many 1 retrogene
retro_shar_189,
Tupaia belangeri ENSTBEG00000000667 ortholog_one2many 1 retrogene
retro_tbel_4634,
Tarsius syrichta ENSTSYG00000014758 ortholog_one2one 1 retrogene
retro_tsyr_802,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pmar_25 64.97 75.36
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Download FASTA sequences of all ENSPMAG00000009335 retrocopies