Parental gene: | SEPHS1, ENSPPYG00000002099 |
| Aliases: | None |
| Description: | Selenide, water dikinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5RF87] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:13939983..13967969(-) |
>ENSPPYG00000002099
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTGGAATCTTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATAGTAGACGACCCTTACATGATGGGCAGGATAGCGTGTGCCAATGT
CCTCAGCGACCTCTATGCAATGGGGGTCACAGAGTGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCTGTAACG
GGCGGCCAAACAGTACTAAACCCGTGGATTGTCCTGGGAGGAGTCGCTACCACTGTTTGCCAGCCCAATGAATTTATCAT
GCCAGACAATGCAGTGCCAGGAGACGTGCTGGTGTTGACAAAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGT
GGCTGGATATTCCTGAGAAATGGAATAAGATTAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAGGAGGCG
ATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACGTTCAATGCCCACGCCGCCACTGACATCAC
GGGCTTCGGGATTTTGGGCCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCC
CGGTGCTGGCCAAGATGGCTGCGGTGAGCAAGGCCTGTGGAAACATGTTCGGCCTCATGCACGGGACTTGCCCGGAGACT
TCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGGCAGAGATAAAGTCCCCCAAATATGGTG
A
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTGGAATCTTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATAGTAGACGACCCTTACATGATGGGCAGGATAGCGTGTGCCAATGT
CCTCAGCGACCTCTATGCAATGGGGGTCACAGAGTGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCTGTAACG
GGCGGCCAAACAGTACTAAACCCGTGGATTGTCCTGGGAGGAGTCGCTACCACTGTTTGCCAGCCCAATGAATTTATCAT
GCCAGACAATGCAGTGCCAGGAGACGTGCTGGTGTTGACAAAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGT
GGCTGGATATTCCTGAGAAATGGAATAAGATTAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAGGAGGCG
ATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACGTTCAATGCCCACGCCGCCACTGACATCAC
GGGCTTCGGGATTTTGGGCCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCC
CGGTGCTGGCCAAGATGGCTGCGGTGAGCAAGGCCTGTGGAAACATGTTCGGCCTCATGCACGGGACTTGCCCGGAGACT
TCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGGCAGAGATAAAGTCCCCCAAATATGGTG
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 19 .85 RPM |
| SRP007412_cerebellum | 29 .79 RPM |
| SRP007412_heart | 8 .34 RPM |
| SRP007412_kidney | 32 .65 RPM |
| SRP007412_liver | 17 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009494 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000003921 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012188 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021233 | possible_ortholog | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000948 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012205 | possible_ortholog | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018125 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1324 | 85.96 | 51.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1378 | 81.79 | 80.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2074 | 91.62 | 99.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2620 | 67.86 | 80.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_3047 | 88.19 | 73.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_3652 | 91.91 | 99.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002099 retrocopies