Parental gene:

NDUFA9, ENSPPYG00000004171

Aliases:None
Description:NADH dehydrogenase [Source:RefSeq peptide;Acc:NP_001127602]
Organism:Orangutan (Pongo abelii)
Coordinates:12:4770940..4812249(+)


>ENSPPYG00000004171
TTGTGGGAAAAGATGGCGGCTGCCGCACAATCCCGGGTTGTCCGGGTCCTGTCAATGTCACGTTCTGCCATTACTGCAAT
AGCCACATCTGTGTGTCACGGCCCACCCCGTCGCCAGCTTCATCATGCCCTCATACCTCATGGGAAAGGTGGACGTTCCT
CAGTCAGTGGGATTGTGGCCACTGTGTTTGGAGCAACAGGATTCCTGGGGCGATATGTTGTCAACCACCTTGGACGCATG
GGGTCACAGGTAATCATACCCTATCGGTGTGATACATATGACATCATGCACCTTCGTCCAATGGGTGACCTGGGCCAGCT
TCTGTTTCTGGAATGGGACGCGAGAGATAAAGATTCTATCCGACGAGTAGTACAACACAGCAATGTGGTCATCAATCTTA
TTGGACGAGACTGGGAAACCAGCAAGCTGAACTTTGAGACAGGGTTTTACCCATACCCCAAGCAACTTGCTCAACTGTCC
AAGGAAGCTGGAGTTGAGAAATTCATTCATGTTTCACATCTGAATGCGAGAGTTGATAAATGCATTCATATATTGAGAAA
TAAGGCTGTTGGAGAGAAAGTAGTGAGAGATGCATTTCCAGAAGCCATTATCATAAAGCCATCGGACATCTTTGGAAGAG
AGGATAGATTCCTTAATTCTTTTGCAAGTATGCATCGGTTTGGTCCTACACCCCTTGGTTCCTTGGGCTGGAAGACAGTT
AAACAACCAGTATATGTCGTAGATGTATCCAAAGGAATTGTTAATGCAGTTAAGGATCCTGATGCCAATGGGAAATCCTT
TGCTTTCGTTGGTCCCAATCGGTACCTTCTCTTTCACCTGGTGAAGTACATCTTTGCTGTGGCTCACAGATTGTTCCTCC
CATTCCCCTTGCCACTTTTTGCCTATCGATGGGTAGCAAGAGTCTTTGAAATAAGCCCATTTGAGCCCTGGATAACAAGG
GATAAAGTGGAGCGGATGCACATCACAGACATGAAATTGCCTCACCTGCCCGGCTTAGAAGACCTTGGTATTCAGGCAAC
ACCACTGGAACTCAAGGCCATTGAGGTGCTGCGGCGTCATCGCACTTACCGCTGGCTGTCTGCTGAAATTGAGGATGTGA
AGCCCGCCAAGACTGTCAACATTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 45 .01 RPM
SRP007412_cerebellum 59 .58 RPM
SRP007412_heart 102 .02 RPM
SRP007412_kidney 48 .69 RPM
SRP007412_liver 28 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000009588 ortholog_one2many 1 retrogene
retro_acar_16,
Danio rerio ENSDARG00000070723 ortholog_one2many 1 retrogene
retro_drer_1,
Homo sapiens ENSG00000139180 ortholog_one2many 1 retrogene
retro_hsap_2585,
Gorilla gorilla ENSGGOG00000006076 ortholog_one2one 1 retrogene
retro_ggor_1618,
Macaca mulatta ENSMMUG00000020813 ortholog_one2one 1 retrogene
retro_mmul_648,
Monodelphis domestica ENSMODG00000018283 ortholog_one2many 1 retrogene
retro_mdom_209,
Nomascus leucogenys ENSNLEG00000003252 ortholog_one2one 1 retrogene
retro_nleu_1520,
Otolemur garnettii ENSOGAG00000005225 ortholog_one2one 1 retrogene
retro_ogar_2244,
Pan troglodytes ENSPTRG00000004557 ortholog_one2one 1 retrogene
retro_ptro_1511,
Ictidomys tridecemlineatus ENSSTOG00000006504 ortholog_one2one 1 retrogene
retro_itri_543,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1905 79.32 100.00
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Download FASTA sequences of all ENSPPYG00000004171 retrocopies