Parental gene: | NDUFA9, ENSPPYG00000004171 |
| Aliases: | None |
| Description: | NADH dehydrogenase [Source:RefSeq peptide;Acc:NP_001127602] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:4770940..4812249(+) |
>ENSPPYG00000004171
TTGTGGGAAAAGATGGCGGCTGCCGCACAATCCCGGGTTGTCCGGGTCCTGTCAATGTCACGTTCTGCCATTACTGCAAT
AGCCACATCTGTGTGTCACGGCCCACCCCGTCGCCAGCTTCATCATGCCCTCATACCTCATGGGAAAGGTGGACGTTCCT
CAGTCAGTGGGATTGTGGCCACTGTGTTTGGAGCAACAGGATTCCTGGGGCGATATGTTGTCAACCACCTTGGACGCATG
GGGTCACAGGTAATCATACCCTATCGGTGTGATACATATGACATCATGCACCTTCGTCCAATGGGTGACCTGGGCCAGCT
TCTGTTTCTGGAATGGGACGCGAGAGATAAAGATTCTATCCGACGAGTAGTACAACACAGCAATGTGGTCATCAATCTTA
TTGGACGAGACTGGGAAACCAGCAAGCTGAACTTTGAGACAGGGTTTTACCCATACCCCAAGCAACTTGCTCAACTGTCC
AAGGAAGCTGGAGTTGAGAAATTCATTCATGTTTCACATCTGAATGCGAGAGTTGATAAATGCATTCATATATTGAGAAA
TAAGGCTGTTGGAGAGAAAGTAGTGAGAGATGCATTTCCAGAAGCCATTATCATAAAGCCATCGGACATCTTTGGAAGAG
AGGATAGATTCCTTAATTCTTTTGCAAGTATGCATCGGTTTGGTCCTACACCCCTTGGTTCCTTGGGCTGGAAGACAGTT
AAACAACCAGTATATGTCGTAGATGTATCCAAAGGAATTGTTAATGCAGTTAAGGATCCTGATGCCAATGGGAAATCCTT
TGCTTTCGTTGGTCCCAATCGGTACCTTCTCTTTCACCTGGTGAAGTACATCTTTGCTGTGGCTCACAGATTGTTCCTCC
CATTCCCCTTGCCACTTTTTGCCTATCGATGGGTAGCAAGAGTCTTTGAAATAAGCCCATTTGAGCCCTGGATAACAAGG
GATAAAGTGGAGCGGATGCACATCACAGACATGAAATTGCCTCACCTGCCCGGCTTAGAAGACCTTGGTATTCAGGCAAC
ACCACTGGAACTCAAGGCCATTGAGGTGCTGCGGCGTCATCGCACTTACCGCTGGCTGTCTGCTGAAATTGAGGATGTGA
AGCCCGCCAAGACTGTCAACATTTAG
TTGTGGGAAAAGATGGCGGCTGCCGCACAATCCCGGGTTGTCCGGGTCCTGTCAATGTCACGTTCTGCCATTACTGCAAT
AGCCACATCTGTGTGTCACGGCCCACCCCGTCGCCAGCTTCATCATGCCCTCATACCTCATGGGAAAGGTGGACGTTCCT
CAGTCAGTGGGATTGTGGCCACTGTGTTTGGAGCAACAGGATTCCTGGGGCGATATGTTGTCAACCACCTTGGACGCATG
GGGTCACAGGTAATCATACCCTATCGGTGTGATACATATGACATCATGCACCTTCGTCCAATGGGTGACCTGGGCCAGCT
TCTGTTTCTGGAATGGGACGCGAGAGATAAAGATTCTATCCGACGAGTAGTACAACACAGCAATGTGGTCATCAATCTTA
TTGGACGAGACTGGGAAACCAGCAAGCTGAACTTTGAGACAGGGTTTTACCCATACCCCAAGCAACTTGCTCAACTGTCC
AAGGAAGCTGGAGTTGAGAAATTCATTCATGTTTCACATCTGAATGCGAGAGTTGATAAATGCATTCATATATTGAGAAA
TAAGGCTGTTGGAGAGAAAGTAGTGAGAGATGCATTTCCAGAAGCCATTATCATAAAGCCATCGGACATCTTTGGAAGAG
AGGATAGATTCCTTAATTCTTTTGCAAGTATGCATCGGTTTGGTCCTACACCCCTTGGTTCCTTGGGCTGGAAGACAGTT
AAACAACCAGTATATGTCGTAGATGTATCCAAAGGAATTGTTAATGCAGTTAAGGATCCTGATGCCAATGGGAAATCCTT
TGCTTTCGTTGGTCCCAATCGGTACCTTCTCTTTCACCTGGTGAAGTACATCTTTGCTGTGGCTCACAGATTGTTCCTCC
CATTCCCCTTGCCACTTTTTGCCTATCGATGGGTAGCAAGAGTCTTTGAAATAAGCCCATTTGAGCCCTGGATAACAAGG
GATAAAGTGGAGCGGATGCACATCACAGACATGAAATTGCCTCACCTGCCCGGCTTAGAAGACCTTGGTATTCAGGCAAC
ACCACTGGAACTCAAGGCCATTGAGGTGCTGCGGCGTCATCGCACTTACCGCTGGCTGTCTGCTGAAATTGAGGATGTGA
AGCCCGCCAAGACTGTCAACATTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 45 .01 RPM |
| SRP007412_cerebellum | 59 .58 RPM |
| SRP007412_heart | 102 .02 RPM |
| SRP007412_kidney | 48 .69 RPM |
| SRP007412_liver | 28 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000009588 | ortholog_one2many | 1 retrogene | |
| Danio rerio | ENSDARG00000070723 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000139180 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006076 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020813 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018283 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003252 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005225 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004557 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006504 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1905 | 79.32 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004171 retrocopies