Parental gene: | NDUFA9, ENSPTRG00000004557 |
| Aliases: | None |
| Description: | Pan troglodytes NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa (NDUFA9), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001079914] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 12:4758977..4797654(+) |
>ENSPTRG00000004557
ATGGCGGCTGCAGCACAATCCCGGGTTGTCCGGGTCCTGTCAATGTCACGTTCTGCCATTACTGCAATAGCCACATCTGT
GTGTCACGGCCCACCCTGTCGCCAGCTTCATCATGCCCTCATGCCTCATGGGAAAGGTGGACGTTCCTCAGTCAGTGGGA
TTGTGGCCACTGTGTTTGGAGCAACAGGATTCCTGGGGCGATATGTTGTCAACCACCTTGGACGCATGGGGTCACAGGTA
ATCATACCCTATCGGTGTGATAAATACGACATCATGCACCTTCGTCCCATGGGTGACCTGGGCCAGCTTCTGTTTCTGGA
ATGGGACGCGAGAGATAAAGATTCTATCCGACAAGTAGTACAACACAGCAATGTGGTCATCAATCTTATTGGACGAGACT
GGGAAACCAAAAACTATGATTTTGAGGATGTTTTTGTGAAGATTCCCCAAGCAATTGCTCAACTGTCCAAGGAAGCTGGA
GTTGAAAAATTCATTCATGTTTCACATCTGAATGCGAATATTAAAAGCTCTTCTAGATATTTGAGAAATAAGGCTGTTGG
AGAGAAAGTAGTGAGAGATGCATTTCCAGAAGCCATTATCATAAAGCCGTCGGACATCTTTGGAAGAGAGGATAGATTCC
TTAATTCTTTTGCAAGTATGCATCGATTTGGTCCTATACCCCTTGGTTCCTTGGGCTGGAAGACAGTTAAACAACCAGTA
TATGTCGTAGATGTATCCAAAGGAATTGTTAATGCAGTTAAGGATCCTGATGCCAACGGGAAATCCTTTGCTTTCGTTGG
TCCCAGTCGGTACCTCCTTTTCCACCTGGTGAAGTACATCTTTGCTGTGGCTCACAGATTGTTCCTCCCATTCCCCTTGC
CACTTTTTGCCTATCGATGGGTAGCAAGAGTCTTTGAAATAAGCCCATTTGAGCCCTGGATAACAAGGGATAAAGTGGAG
CGGATGCACATCACAGACATGAAATTGCCTCACCTGCCTGGCTTAGAAGACCTTGGTATTCAGGCAACACCACTGGAACT
CAAGGCCATTGAGGTGCTGCGGCGTCATCGCACTTACCGCTGGCTGTCTGCTGAAATTGAGGATGTGAAGCCGGCCAAGA
CCGTCAACATTTAG
ATGGCGGCTGCAGCACAATCCCGGGTTGTCCGGGTCCTGTCAATGTCACGTTCTGCCATTACTGCAATAGCCACATCTGT
GTGTCACGGCCCACCCTGTCGCCAGCTTCATCATGCCCTCATGCCTCATGGGAAAGGTGGACGTTCCTCAGTCAGTGGGA
TTGTGGCCACTGTGTTTGGAGCAACAGGATTCCTGGGGCGATATGTTGTCAACCACCTTGGACGCATGGGGTCACAGGTA
ATCATACCCTATCGGTGTGATAAATACGACATCATGCACCTTCGTCCCATGGGTGACCTGGGCCAGCTTCTGTTTCTGGA
ATGGGACGCGAGAGATAAAGATTCTATCCGACAAGTAGTACAACACAGCAATGTGGTCATCAATCTTATTGGACGAGACT
GGGAAACCAAAAACTATGATTTTGAGGATGTTTTTGTGAAGATTCCCCAAGCAATTGCTCAACTGTCCAAGGAAGCTGGA
GTTGAAAAATTCATTCATGTTTCACATCTGAATGCGAATATTAAAAGCTCTTCTAGATATTTGAGAAATAAGGCTGTTGG
AGAGAAAGTAGTGAGAGATGCATTTCCAGAAGCCATTATCATAAAGCCGTCGGACATCTTTGGAAGAGAGGATAGATTCC
TTAATTCTTTTGCAAGTATGCATCGATTTGGTCCTATACCCCTTGGTTCCTTGGGCTGGAAGACAGTTAAACAACCAGTA
TATGTCGTAGATGTATCCAAAGGAATTGTTAATGCAGTTAAGGATCCTGATGCCAACGGGAAATCCTTTGCTTTCGTTGG
TCCCAGTCGGTACCTCCTTTTCCACCTGGTGAAGTACATCTTTGCTGTGGCTCACAGATTGTTCCTCCCATTCCCCTTGC
CACTTTTTGCCTATCGATGGGTAGCAAGAGTCTTTGAAATAAGCCCATTTGAGCCCTGGATAACAAGGGATAAAGTGGAG
CGGATGCACATCACAGACATGAAATTGCCTCACCTGCCTGGCTTAGAAGACCTTGGTATTCAGGCAACACCACTGGAACT
CAAGGCCATTGAGGTGCTGCGGCGTCATCGCACTTACCGCTGGCTGTCTGCTGAAATTGAGGATGTGAAGCCGGCCAAGA
CCGTCAACATTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 51 .67 RPM |
| SRP007412_cerebellum | 41 .41 RPM |
| SRP007412_heart | 139 .49 RPM |
| SRP007412_kidney | 94 .38 RPM |
| SRP007412_liver | 50 .61 RPM |
| SRP007412_testis | 24 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000009588 | ortholog_one2many | 1 retrogene | |
| Danio rerio | ENSDARG00000070723 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000139180 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006076 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020813 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018283 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003252 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005225 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004171 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006504 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1511 | 81.94 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000004557 retrocopies