Parental gene:

MED21, ENSPPYG00000004377

Aliases:None
Description:mediator of RNA polymerase II transcription subunit 21 [Source:RefSeq peptide;Acc:NP_001124922]
Organism:Orangutan (Pongo abelii)
Coordinates:12:28087063..28093202(+)


>ENSPPYG00000004377
ATGGCGGATCGGCTCACGCAGCTTCAAGACGCTGTAAATTCGCTTGCAGATCAGTTTTGTAATGCCATTGGAGTATTGCA
GCAATGTGGTCCTCCTGCCTCTTTCAGTAATATTCAGACAGCAATTAACAAAGACCAGCCAGCTAACTCTACAGAAGAGT
ACGCCCAGCTTTTTGCAGCACTGATTGCACGAACAGCAAAAGACATTGATGCGAGGAACTGCATTCCTTTGGAGGAGGAG
AGTTTTTCTGCTCTGTTTGCTGCTAGCTTGTATAAGCTAGAAGAAGAAAACCATGAAGCTGCTACATGTCTGGAGGATGT
TGTTTATCGAGGAGACATGCTTCTGGAAAAGATACAAAGTGCACTTGCTGATATTGCACAGTCACAGCTGAAGACAAGAA
GTGGTACCCATAGCCAGTCTCTTCCAGACTCATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .48 RPM
SRP007412_cerebellum 6 .69 RPM
SRP007412_heart 7 .04 RPM
SRP007412_kidney 5 .57 RPM
SRP007412_liver 4 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011670 ortholog_one2many 1 retrogene
retro_amel_108,
Dasypus novemcinctus ENSDNOG00000010041 ortholog_one2one 1 retrogene
retro_dnov_998,
Echinops telfairi ENSETEG00000006223 ortholog_one2one 1 retrogene
retro_etel_1141,
Felis catus ENSFCAG00000030691 ortholog_one2one 1 retrogene
retro_fcat_1101,
Homo sapiens ENSG00000152944 ortholog_one2one 1 retrogene
retro_hsap_4105,
Gorilla gorilla ENSGGOG00000016313 ortholog_one2one 1 retrogene
retro_ggor_2756,
Myotis lucifugus ENSMLUG00000007678 ortholog_one2many 1 retrogene
retro_mluc_229,
Macaca mulatta ENSMMUG00000003218 ortholog_one2one 1 retrogene
retro_mmul_2365,
Nomascus leucogenys ENSNLEG00000005431 ortholog_one2one 1 retrogene
retro_nleu_573,
Pan troglodytes ENSPTRG00000004785 ortholog_one2one 1 retrogene
retro_ptro_2786,
Pteropus vampyrus ENSPVAG00000013357 ortholog_one2one 1 retrogene
retro_pvam_449,
Ictidomys tridecemlineatus ENSSTOG00000008391 ortholog_one2one 2 retrogenes
retro_itri_1005, retro_itri_1057,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3361 67.33 70.14
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Download FASTA sequences of all ENSPPYG00000004377 retrocopies