Parental gene: | MYL6, ENSPPYG00000004647 |
| Aliases: | None |
| Description: | myosin light polypeptide 6 [Source:RefSeq peptide;Acc:NP_001126203] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:55918802..55922001(+) |
>ENSPPYG00000004647
ATGTGTGACTTCACCGAAGACCAGACCGCAGAGTTCAAGGAGGCCTTCCAGCTGTTTGACCGAACAGGTGATGGCAAGAT
CCTGTACAGCCAGTGTGGGGATGTGATGAGGGCCCTGGGCCAGAACCCTACCAACGCCGAGGTGCTCAAGGTCCTGGGGA
ACCCCAAGAGTGATGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTTCTGCCCATGCTGCAGACAGTGGCCAAGAAC
AAGGACCAGGGCACCTATGAGGATTATGTCGAAGGACTTCGGGTGTTTGACAAGGAAGGAAATGGCACCGTCATGGGTGC
TGAAATCCGGCATGTTCTTGTCACACTGGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTAGTGGCAGGGCACGAGG
ACAGCAATGGTTGTATCAACTATGAAGAGCTCGTCCGCATGGTGCTGAATGGCTGA
ATGTGTGACTTCACCGAAGACCAGACCGCAGAGTTCAAGGAGGCCTTCCAGCTGTTTGACCGAACAGGTGATGGCAAGAT
CCTGTACAGCCAGTGTGGGGATGTGATGAGGGCCCTGGGCCAGAACCCTACCAACGCCGAGGTGCTCAAGGTCCTGGGGA
ACCCCAAGAGTGATGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTTCTGCCCATGCTGCAGACAGTGGCCAAGAAC
AAGGACCAGGGCACCTATGAGGATTATGTCGAAGGACTTCGGGTGTTTGACAAGGAAGGAAATGGCACCGTCATGGGTGC
TGAAATCCGGCATGTTCTTGTCACACTGGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTAGTGGCAGGGCACGAGG
ACAGCAATGGTTGTATCAACTATGAAGAGCTCGTCCGCATGGTGCTGAATGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 140 .94 RPM |
| SRP007412_cerebellum | 193 .71 RPM |
| SRP007412_heart | 149 .37 RPM |
| SRP007412_kidney | 341 .88 RPM |
| SRP007412_liver | 295 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000001272 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000031838 | possible_ortholog | 6 retrogenes | |
| Mus musculus | ENSMUSG00000090841 | ortholog_one2one | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000205 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017371 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000034596 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004646 | within_species_paralog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000004472 | ortholog_one2one | 6 retrogenes | |
| Sus scrofa | ENSSSCG00000025467 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000023318 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_538 | 81.70 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1467 | 84.11 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1864 | 80.56 | 94.70 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004647 retrocopies