Parental gene:

NDUFA12, ENSPPYG00000004839

Aliases:None
Description:NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Source:HGNC Symbol;Acc:23987]
Organism:Orangutan (Pongo abelii)
Coordinates:12:96112558..96147194(-)


>ENSPPYG00000004839
ATGGAGTTAGTGCAGGTCTTGAAACGCGGGCTGCAACGGATCACCGGCCACGGCGGTCTCCGAGGCTATCTACGGGTTTT
TTTCAGGACAAATGATGCGAAGGTTGGTACATTAGTAGGGGAAGACAAATATGGAAACAAATACTATGAAGACAACAAGC
AATTTTTTGGCCGTCACCGATGGGTTGTATATACTACTGAAATGAATGGCAAAAACACATTCTGGGATGTGGATGGAAGC
ATGGTGCCTCCTGAATGGCATCATTGGCTTCACAGTATAACTGATGATCCTCCAACAACAAAACCACTTACTGCTCGTAA
ATTCATTTGGACAAACCATAAATTCAACGTGACTGGCACCCCAGAACAATATGTACCTTATTCTACCACTAGAAAGAAGA
TTCAGGAGTGGATCCCACCTTCAACACCTTACAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 27 .81 RPM
SRP007412_cerebellum 28 .94 RPM
SRP007412_heart 62 .95 RPM
SRP007412_kidney 25 .59 RPM
SRP007412_liver 16 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002294 ortholog_one2one 2 retrogenes
retro_amel_1069, retro_amel_1414,
Bos taurus ENSBTAG00000014669 ortholog_one2one 4 retrogenes
retro_btau_1294, retro_btau_1377, retro_btau_1449, retro_btau_869,
Choloepus hoffmanni ENSCHOG00000007134 ortholog_one2one 2 retrogenes
retro_chof_2234, retro_chof_2322,
Callithrix jacchus ENSCJAG00000002846 ortholog_one2one 2 retrogenes
retro_cjac_1796, retro_cjac_1862,
Cavia porcellus ENSCPOG00000010154 ortholog_one2one 2 retrogenes
retro_cpor_1326, retro_cpor_650,
Dasypus novemcinctus ENSDNOG00000009192 ortholog_one2one 1 retrogene
retro_dnov_1859,
Equus caballus ENSECAG00000015836 ortholog_one2one 1 retrogene
retro_ecab_910,
Echinops telfairi ENSETEG00000010118 ortholog_one2one 2 retrogenes
retro_etel_1401, retro_etel_787,
Felis catus ENSFCAG00000023050 ortholog_one2one 3 retrogenes
retro_fcat_1283, retro_fcat_1483, retro_fcat_362,
Homo sapiens ENSG00000184752 ortholog_one2one 3 retrogenes
retro_hsap_1293, retro_hsap_3199, retro_hsap_3312,
Gorilla gorilla ENSGGOG00000012880 ortholog_one2one 1 retrogene
retro_ggor_1015,
Loxodonta africana ENSLAFG00000030887 ortholog_one2one 1 retrogene
retro_lafr_671,
Microcebus murinus ENSMICG00000008634 ortholog_one2one 3 retrogenes
retro_mmur_1630, retro_mmur_224, retro_mmur_544,
Myotis lucifugus ENSMLUG00000027131 ortholog_one2one 1 retrogene
retro_mluc_908,
Macaca mulatta ENSMMUG00000018897 ortholog_one2one 1 retrogene
retro_mmul_1321,
Mustela putorius furo ENSMPUG00000007354 ortholog_one2one 1 retrogene
retro_mputfur_1257,
Mus musculus ENSMUSG00000020022 ortholog_one2one 1 retrogene
retro_mmus_2605,
Nomascus leucogenys ENSNLEG00000005766 ortholog_one2one 2 retrogenes
retro_nleu_2105, retro_nleu_2756,
Otolemur garnettii ENSOGAG00000010853 ortholog_one2one 5 retrogenes
retro_ogar_1158, retro_ogar_1310, retro_ogar_2943, retro_ogar_455, retro_ogar_896,
Pan troglodytes ENSPTRG00000005306 ortholog_one2one 2 retrogenes
retro_ptro_2159, retro_ptro_885,
Pteropus vampyrus ENSPVAG00000007564 ortholog_one2one 5 retrogenes
retro_pvam_1141, retro_pvam_1457, retro_pvam_33, retro_pvam_375, retro_pvam_661,
Rattus norvegicus ENSRNOG00000007407 ortholog_one2one 1 retrogene
retro_rnor_874,
Sorex araneus ENSSARG00000013220 ortholog_one2one 1 retrogene
retro_sara_442,
Sus scrofa ENSSSCG00000000905 ortholog_one2one 1 retrogene
retro_sscr_802,
Tupaia belangeri ENSTBEG00000013724 ortholog_one2one 8 retrogenes
retro_tbel_1707, retro_tbel_2577, retro_tbel_2822, retro_tbel_2888, retro_tbel_3320, retro_tbel_3566, retro_tbel_4553, retro_tbel_4577,
Tursiops truncatus ENSTTRG00000015720 ortholog_one2one 2 retrogenes
retro_ttru_1607, retro_ttru_1880,
Vicugna pacos ENSVPAG00000008508 ortholog_one2one 1 retrogene
retro_vpac_332,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1071 58.41 77.24
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2. retro_pabe_2652 52.88 69.66
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Download FASTA sequences of all ENSPPYG00000004839 retrocopies