RetrogeneDB ID: | retro_pvam_1141 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_32006:2577..2831(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFA12 | ||
Ensembl ID: | ENSPVAG00000007564 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Source:HGNC Symbol;Acc:23987] |
Percent Identity: | 79.07 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MEFLQVLKRGLQQVSGHGGLRGYLRVLFRANDVRVGTLVGEDKYGNKYYEDN-KQFFGRHRWVIYTTEMN |
MEFL.VL.RGL.QV.GHGGL.G.LR..FR.NDVRVGT.VGEDKYGNKYYEDN..QF.GRHRWVIYTTE.N | |
Retrocopy | MEFLPVLERGLWQVNGHGGLQGCLRTFFRTNDVRVGT*VGEDKYGNKYYEDN<QQF*GRHRWVIYTTEVN |
Parental | GKNTFWDVDGSMVPPE |
.KNTFWD.DGSMV..E | |
Retrocopy | DKNTFWDTDGSMVTTE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |