Parental gene:

ENSPPYG00000004939

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:12:111629207..111637367(-)


>ENSPPYG00000004939
TGCCTTGGGTCCCCAGTGTTTACTCCCATCAAGGCAGACATAAGCGGCAACATCATGAAAATCAAAACTGTGTACGATAC
CAACCCAGCCAAGTTCCGGACCCTGCAGAACATCCTGGAGGTGGAGAAAGAAATGTATGGAGCAGAGTGGCCCAAAGTAG
GGGCCACACTGGCGCTGATGTGGCTGAAAAGAGGCCTCCGCTTCATCCAGGTCTTCCTCCAGAGCATCTGCGACGGGGAG
CGGGACGAGAACCACCCCAACCTCATTCGTGTCAACGCCACCAAGGCCTACGAGATGGCCCTCAAGAAGTACCATGGCTG
GATCGTGCAGAAGATCTTCCAGGCAGCACTGTACGCAGCACCCTATAAGTCCGACTTCCTGAAAGCGCTCTCCAAGGGGC
AGAATGTGACAGAGGAGGAGTGCCTGGAGAAGATCCGCCTCTTCCTAGTCAACTACACGGCGACCATCGATGTCATCTAC
GAGATGTACACCCAGATGAACGCTGAGCTTAATTACAAGGTGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .07 RPM
SRP007412_cerebellum 17 .15 RPM
SRP007412_heart 6 .08 RPM
SRP007412_kidney 30 .79 RPM
SRP007412_liver 13 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000034092 possible_ortholog 1 retrogene
retro_cjac_1284,
Echinops telfairi ENSETEG00000016033 possible_ortholog 1 retrogene
retro_etel_1197,
Homo sapiens ENSG00000139433 possible_ortholog 1 retrogene
retro_hsap_755,
Myotis lucifugus ENSMLUG00000012545 possible_ortholog 5 retrogenes
retro_mluc_1056, retro_mluc_1902, retro_mluc_2135, retro_mluc_2397, retro_mluc_658,
Macaca mulatta ENSMMUG00000022761 possible_ortholog 1 retrogene
retro_mmul_2261,
Pongo abelii ENSPPYG00000017682 within_species_paralog 1 retrogene
retro_pabe_919,
Pan troglodytes ENSPTRG00000005431 possible_ortholog 1 retrogene
retro_ptro_41,
Rattus norvegicus ENSRNOG00000001192 ortholog_one2many 1 retrogene
retro_rnor_2465,
Ictidomys tridecemlineatus ENSSTOG00000004484 possible_ortholog 1 retrogene
retro_itri_973,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_28 93.68 100.00
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Download FASTA sequences of all ENSPPYG00000004939 retrocopies