Parental gene: | CDC27, ENSPPYG00000008945 |
| Aliases: | None |
| Description: | cell division cycle 27 [Source:HGNC Symbol;Acc:1728] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17_random:15007852..15079899(-) |
>ENSPPYG00000008945
ATGACGGTGCTGCAGGAACCCGTCCAGGCTGCTATATGGCAAGCACTAAACCACTATGCTTACCGAGATGCGGTTTTCCT
CGCAGAACGTCTTTATGCAGAANTACACTCAGAAGAAGCCTTGTTTTTACTGGCAACCTGTTATTACCGCTCAGGAAAGG
CATATAAAGCATATAGACTCTTGAAAGGACACAGTTGTACTACACCGCAATGCAAATACCTGCTTGCAAAATGTTGTGTT
GATCTCAGCAAGCTTGCAGAAGGGGAACAAATCTTATCTGGTGGAGTGTTTAATAAGCAGAAAAGCCATGATGATATTGT
TACTGAGTTTGGTGATTCAGCTTGCTTTACTCTTTCATTGTTGGGACATGTATATTGCAAGACAGATCGGCTTGCCAAAG
GATCAGAATGTTACCAAAAGAGCCTTAGTTTAAATCCTTTCCTCTGGTCTCCCTTTGAATCATTATGTGAAATAGGTGAA
AAGCCAGATCCTGACCAAACATTTAAATTCACATCTTTACAGAACTTTAGCAACTGTCTGCCCAACTCTTGCACAACACA
AGTACCTAATCATAGTTTATCTCACAGACAGCCTGAGACAGTTCTTACGGAAACACCCCAGGACACAATTGAATTAAACA
GATTGAATTTAGAATCTTCCAATTCAAAGTACTCCTTGAATACAGATTCCTCAGTGTCTTATATTGATTCAGCTGTAATT
TCACCTGATACTGTCCCACTGGGAACAGGAACTTCCATATTATCTAAACAGGTTCAAAATAAACCAAAAACTGGTCGAAG
TTTATTAGGAGGACCAGCAGCTCTTAGTCCATTAACCCCAAGTTTTGGGATTTTGCCATTAGAAACCCCAAGTCCTGGAG
ATGGATCCTATTTACAAAACTACACTAATACACCTTCTGTAATTGACGTGCCATCCACCGGAGCCCCTTCAAAAAAGTCT
GTTGCCAGAATCGGCCAAAGTGGAACAAAGTCTGTCTTCTCACAGAGTGGAAATAGCCGAGAGGTAACTCCAATTCTTGC
ACAAACACAAAGTTCTGGTCCACAAACAAGTACAACACCTCAGGTATTGAGCCCCACTATTACATCTCCCACAAACGCAC
TGCCTCGAAGAAGTTCACGACTCTTTACTAGTGACAGCTCCACAACCAAGGAGAATAGCAAAAAATTAAAAATGAAGTTT
CCACCTAAAATCCCAAACAGAAAAACAAAAAGTAAAACTAATAAAGGAGGAATAACTCAACCTAACATAAATGATAGCCT
GGAAATTACAAAATTGGACTCTTCCATCATTTCAGAAGGGAAAATATCCACAATCACACCTCAGATTCAGGCCTTTAATC
TACAAAAAGCAGCAGCAGAAGGTTTGATGAGCCTTCTTCGTGAAATGGGGAAAGGTTATTTAGCTCTGTGTTCATACAAC
TGCAAAGAAGCTATAAATATTTTGAGCCATCTACCTTCTCACCACTACAATACTGGTTGGGTACTGTGCCAAATTGGAAG
GGCCTATTTTGAACTTTCAGAGTACATGCAAGCTGAAAGAATATTCTCAGAGGTTAGAAGGATTGAGAATTATAGAGTTG
AAGGCATGGAGATCTACTCTACAACACTTTGGCATCTTCAAAAAGATGTTGCTCTTTCAGTTCTGTCGAAAGACTTAACA
GACATGGATAAAAATTCGCCAGAGGCCTGGTGTGCTGCAGGGAACTGTTTCAGTCTGCAACGGGAACATGATATTGCAAT
TAAATTCTTCCAGAGAGCTATCCAAGTTGATCCAAATTATGCTTATGCCTATACTCTATTAGGGCATGAGTTTGTCTTAA
CTGAAGAATTGGACAAAGCATTAGCTTGTTTTCGAAATGCTATCAGAGTCAATCCTAGACATTATAATGCATGGTATGGT
TTAGGAATGATTTATTACAAGCAAGAAAAATTCAGCCTTGCAGAAATGCATTTCCAAAAAGCACTTGATATCAACCCTCA
AAGTTCAGTTTTACTTTGCCACATTGGAGTAGTTCAACATGCACTGAAAAAATCAGAGAAGGCTTTGGATACCCTAAACA
AAGCCATTGTCATTGATCCCAAGAACCCTCTATGCAAATTTCACAGAGCCTCAGTTTTATTTGCAAATGAAAAATATAAG
TCTGCTTTACAAGAACTTGAAGAATTGAAACAAATTGTTCCCAAAGAATCCCTCGTTTACTTCTTAATAGGAAAGGTTTA
CAAGAAGTTAGGTCAAACGCACCTCGCCCTGATGAATTTCTCTTGGGCTATGGATTTAGATCCTAAAGGAGCCAATAACC
AGATTAAAGAGGCAATTGATAAGCGTTATCTTCCAGATGATGAGGAGCCAATAACCCAAGAAGAACAGATCATGGGAACA
GATGAATCCCAGGAGAGCAGCATGACAGATGCAGATGACACACAACTTCATGCAGCTGAAAGTGATGAATTT
ATGACGGTGCTGCAGGAACCCGTCCAGGCTGCTATATGGCAAGCACTAAACCACTATGCTTACCGAGATGCGGTTTTCCT
CGCAGAACGTCTTTATGCAGAANTACACTCAGAAGAAGCCTTGTTTTTACTGGCAACCTGTTATTACCGCTCAGGAAAGG
CATATAAAGCATATAGACTCTTGAAAGGACACAGTTGTACTACACCGCAATGCAAATACCTGCTTGCAAAATGTTGTGTT
GATCTCAGCAAGCTTGCAGAAGGGGAACAAATCTTATCTGGTGGAGTGTTTAATAAGCAGAAAAGCCATGATGATATTGT
TACTGAGTTTGGTGATTCAGCTTGCTTTACTCTTTCATTGTTGGGACATGTATATTGCAAGACAGATCGGCTTGCCAAAG
GATCAGAATGTTACCAAAAGAGCCTTAGTTTAAATCCTTTCCTCTGGTCTCCCTTTGAATCATTATGTGAAATAGGTGAA
AAGCCAGATCCTGACCAAACATTTAAATTCACATCTTTACAGAACTTTAGCAACTGTCTGCCCAACTCTTGCACAACACA
AGTACCTAATCATAGTTTATCTCACAGACAGCCTGAGACAGTTCTTACGGAAACACCCCAGGACACAATTGAATTAAACA
GATTGAATTTAGAATCTTCCAATTCAAAGTACTCCTTGAATACAGATTCCTCAGTGTCTTATATTGATTCAGCTGTAATT
TCACCTGATACTGTCCCACTGGGAACAGGAACTTCCATATTATCTAAACAGGTTCAAAATAAACCAAAAACTGGTCGAAG
TTTATTAGGAGGACCAGCAGCTCTTAGTCCATTAACCCCAAGTTTTGGGATTTTGCCATTAGAAACCCCAAGTCCTGGAG
ATGGATCCTATTTACAAAACTACACTAATACACCTTCTGTAATTGACGTGCCATCCACCGGAGCCCCTTCAAAAAAGTCT
GTTGCCAGAATCGGCCAAAGTGGAACAAAGTCTGTCTTCTCACAGAGTGGAAATAGCCGAGAGGTAACTCCAATTCTTGC
ACAAACACAAAGTTCTGGTCCACAAACAAGTACAACACCTCAGGTATTGAGCCCCACTATTACATCTCCCACAAACGCAC
TGCCTCGAAGAAGTTCACGACTCTTTACTAGTGACAGCTCCACAACCAAGGAGAATAGCAAAAAATTAAAAATGAAGTTT
CCACCTAAAATCCCAAACAGAAAAACAAAAAGTAAAACTAATAAAGGAGGAATAACTCAACCTAACATAAATGATAGCCT
GGAAATTACAAAATTGGACTCTTCCATCATTTCAGAAGGGAAAATATCCACAATCACACCTCAGATTCAGGCCTTTAATC
TACAAAAAGCAGCAGCAGAAGGTTTGATGAGCCTTCTTCGTGAAATGGGGAAAGGTTATTTAGCTCTGTGTTCATACAAC
TGCAAAGAAGCTATAAATATTTTGAGCCATCTACCTTCTCACCACTACAATACTGGTTGGGTACTGTGCCAAATTGGAAG
GGCCTATTTTGAACTTTCAGAGTACATGCAAGCTGAAAGAATATTCTCAGAGGTTAGAAGGATTGAGAATTATAGAGTTG
AAGGCATGGAGATCTACTCTACAACACTTTGGCATCTTCAAAAAGATGTTGCTCTTTCAGTTCTGTCGAAAGACTTAACA
GACATGGATAAAAATTCGCCAGAGGCCTGGTGTGCTGCAGGGAACTGTTTCAGTCTGCAACGGGAACATGATATTGCAAT
TAAATTCTTCCAGAGAGCTATCCAAGTTGATCCAAATTATGCTTATGCCTATACTCTATTAGGGCATGAGTTTGTCTTAA
CTGAAGAATTGGACAAAGCATTAGCTTGTTTTCGAAATGCTATCAGAGTCAATCCTAGACATTATAATGCATGGTATGGT
TTAGGAATGATTTATTACAAGCAAGAAAAATTCAGCCTTGCAGAAATGCATTTCCAAAAAGCACTTGATATCAACCCTCA
AAGTTCAGTTTTACTTTGCCACATTGGAGTAGTTCAACATGCACTGAAAAAATCAGAGAAGGCTTTGGATACCCTAAACA
AAGCCATTGTCATTGATCCCAAGAACCCTCTATGCAAATTTCACAGAGCCTCAGTTTTATTTGCAAATGAAAAATATAAG
TCTGCTTTACAAGAACTTGAAGAATTGAAACAAATTGTTCCCAAAGAATCCCTCGTTTACTTCTTAATAGGAAAGGTTTA
CAAGAAGTTAGGTCAAACGCACCTCGCCCTGATGAATTTCTCTTGGGCTATGGATTTAGATCCTAAAGGAGCCAATAACC
AGATTAAAGAGGCAATTGATAAGCGTTATCTTCCAGATGATGAGGAGCCAATAACCCAAGAAGAACAGATCATGGGAACA
GATGAATCCCAGGAGAGCAGCATGACAGATGCAGATGACACACAACTTCATGCAGCTGAAAGTGATGAATTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 43 .24 RPM |
| SRP007412_cerebellum | 52 .05 RPM |
| SRP007412_heart | 16 .95 RPM |
| SRP007412_kidney | 14 .25 RPM |
| SRP007412_liver | 15 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000004897 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000009326 | ortholog_one2one | 9 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2094 | 87.32 | 77.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2169 | 87.77 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2170 | 85.60 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2172 | 87.19 | 73.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2178 | 84.38 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2182 | 88.40 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_2183 | 87.40 | 61.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_2184 | 85.87 | 65.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_2185 | 85.18 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_pabe_2186 | 86.93 | 71.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_pabe_2190 | 82.14 | 54.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_pabe_2192 | 86.99 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_pabe_3526 | 84.51 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_pabe_3545 | 84.60 | 50.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_pabe_3547 | 86.93 | 58.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_pabe_3550 | 88.21 | 72.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_pabe_3551 | 86.07 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_pabe_3553 | 89.81 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_pabe_3556 | 87.00 | 67.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_pabe_3582 | 84.26 | 74.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_pabe_3583 | 87.47 | 52.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_pabe_3589 | 88.09 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_pabe_3592 | 84.97 | 76.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_pabe_3598 | 88.56 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_pabe_3599 | 88.24 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_pabe_3603 | 85.56 | 77.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_pabe_3605 | 85.05 | 59.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_pabe_3606 | 84.48 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_pabe_3607 | 89.34 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_pabe_3609 | 85.98 | 71.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_pabe_3610 | 84.13 | 65.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_pabe_3827 | 88.54 | 65.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_pabe_3828 | 87.62 | 50.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_pabe_3833 | 86.54 | 50.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 35. | retro_pabe_3834 | 86.68 | 77.43 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000008945 retrocopies