Parental gene: | PPP1R2, ENSPPYG00000014429 |
| Aliases: | None |
| Description: | protein phosphatase 1, regulatory (inhibitor) subunit 2 [Source:HGNC Symbol;Acc:9288] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:199535982..199566497(-) |
>ENSPPYG00000014429
ATGGCGGCCTCGACGGCCTCGCACCGGCCCATCAAGGGGATCTTGAAGAACAAGACCTCTACCACTTCCTCTATGGTGGC
GTCGGCCGAACAGCCCCGCGGGAATGTCGACGAGGAGCTGAGCAAAAAGTCCCAGAAGTGGGATGAAATGAACATCTTGG
CGACGTATCATCCGGCAGATAAAGACTATGGTTTAATGAAAATAGATGAACCAAGCACTCCTTACCATAGTATGATGGGT
GATGATGAAGACGCGTGTAGTGACACCGAGACCACTGAAGCCATGGCGCCAGACATCTTAGCCAAGAAATTAGCTGCTGC
TGAAGGCTTGGAGCCAAAGTATCGGATTCAGGAACAGGAAAGCAGTGGAGAGGAGGATAGTGACCTCTCACCTGAAGAAC
GAGAAAAAAAGCGACAATTTGAAATGAAAAGGAAGCTTCACTACAATGAAGGACTCAATATCAAACTAGCCAGACAATTA
ATTTCAAAAGACCTACATGATGATGATGAAGATGAAGAAATGTTAGAGACTGCAGATGGAGAAAGCATGAATACGGAAGA
ATCAAATCAAGGATCTACTCCAAGTGACCAACAGCAAAACAAATTACGAAGTTCATAG
ATGGCGGCCTCGACGGCCTCGCACCGGCCCATCAAGGGGATCTTGAAGAACAAGACCTCTACCACTTCCTCTATGGTGGC
GTCGGCCGAACAGCCCCGCGGGAATGTCGACGAGGAGCTGAGCAAAAAGTCCCAGAAGTGGGATGAAATGAACATCTTGG
CGACGTATCATCCGGCAGATAAAGACTATGGTTTAATGAAAATAGATGAACCAAGCACTCCTTACCATAGTATGATGGGT
GATGATGAAGACGCGTGTAGTGACACCGAGACCACTGAAGCCATGGCGCCAGACATCTTAGCCAAGAAATTAGCTGCTGC
TGAAGGCTTGGAGCCAAAGTATCGGATTCAGGAACAGGAAAGCAGTGGAGAGGAGGATAGTGACCTCTCACCTGAAGAAC
GAGAAAAAAAGCGACAATTTGAAATGAAAAGGAAGCTTCACTACAATGAAGGACTCAATATCAAACTAGCCAGACAATTA
ATTTCAAAAGACCTACATGATGATGATGAAGATGAAGAAATGTTAGAGACTGCAGATGGAGAAAGCATGAATACGGAAGA
ATCAAATCAAGGATCTACTCCAAGTGACCAACAGCAAAACAAATTACGAAGTTCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .99 RPM |
| SRP007412_cerebellum | 19 .94 RPM |
| SRP007412_heart | 12 .79 RPM |
| SRP007412_kidney | 19 .89 RPM |
| SRP007412_liver | 9 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009410 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000032648 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013210 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013876 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000022006 | ortholog_many2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000023619 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000018050 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000024749 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000184203 | ortholog_one2one | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000025908 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000012010 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019396 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003753 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000047714 | ortholog_one2many | 8 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008371 | ortholog_one2many | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014123 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002597 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000013614 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000011638 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001733 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000011830 | ortholog_many2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000030455 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_96 | 82.61 | 78.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_105 | 95.61 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1056 | 84.29 | 93.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1979 | 76.81 | 99.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_3025 | 88.05 | 77.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_3105 | 80.00 | 56.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014429 retrocopies