Parental gene:

SDAD1, ENSPPYG00000014852

Aliases:None
Description:SDA1 domain containing 1 [Source:HGNC Symbol;Acc:25537]
Organism:Orangutan (Pongo abelii)
Coordinates:4:79272639..79316191(-)


>ENSPPYG00000014852
ATGTCCAGCAGAAACAACAACAAGCTGCCCAGCAACCTGCCGCAGTTACAGAATCTAATCAAGCGAGACCCGCCGGCCTA
CATCGAGGAGTTTCTACAGCAGTATAATCACTACAAATCCAATGTGGAGATTTTCAAATTGCAACCAAATAAACCCAGCA
AAGAACTAGCAGAGCTGGTGATGTTTATGGCACAGATTAGTCACTGCTACCCAGAGTACCTAAGTAATTTTCCTCAAGAG
GTGAAAGATCTTCTCTCCTGCAATCATACCGTATTGGATCCAGATCTTCGAATGACATTTTGCAAAGCTTTGATCTTGCT
GAGAAATAAGAATCTCATCAATCCATCAAGCCTGCTAGAACTCTTCTTTGAACTTCTTCGTTGCCATGATAAGCTTCTGC
GAAAGACTTTATACACACATATTGTGACTGATATCAAGAATATAAATGCAAAACACAAGAACAATAAAGTGAATGTAGTA
TTGCAAAATTTCATGTACACCATGTTAAGAGATAGCAATGCAACCGCAGCCAAGATGTCTTTAGATGTAATGATTGAACT
CTACAGAAGGAACATCTGGAATGATGCCAAAACTGTCAATGTTATCACAACTGCATGCTTCTCTAAGGTCACCAAGATGT
TAGTTGCCGCTTTGACATTCTTTCTTGGGAAAGATGAAGATGAAAAACAGGACAGTGACTCCGAATCTGAGGATGATGGA
CCAACAGCAAGAGACCTGCTAGTACAATATGCTACAGGGAAGAAAAGTTCCAAAAACAAGAAAAAGTTGGAAAAGGCAAT
GAAAGTACTCAAGAAACAAAAAAAGAAGAAAAAACCAGAGGTGTTTAACTTTTCAGCCATTCACTTGATTCATGATCCCC
AAGATTTTGCGGAAAAACTACTAAAGCAGCTTGAGTGCTGTAAGGAGAGGTTTGAAGTGAAGATGATGCTCATGAACCTC
ATCTCCAGATTGGTGGGAATTCATGAGCTTTTCCTCTTCAATTTCTATCCCTTTTTGCAAAGGTTTCTGCAGCCCCACCA
AAGAGAAGTAACAAAGATCCTTCTGTTTGCTGCACAAGCATCTCATCACCTAGTACCCCCAGAGATTATTCAATCATTGC
TTATGACTGTGGCAAACAATTTTGTTACCGACAAGAACTCTGGAGAAGTCATGACAGTAGGAATCAATGCTATAAAGGAG
ATAACAGCTCGATGTCCTCTGGCCATGACTGAAGAACTTCTCCAAGACCTGGCTCAGTATAAAACACACAAGGATAAGAA
TGTAATGATGTCTGCTAGAACTTTGATTCACCTCTTCCGAACACTGAATCCTCAGATGCTGCAGAAGAAATTCCGGGGTA
AGCCTACAGAGGCCTCCATAGAAGCAAGAGTACAAGAATATGGAGAATTAGATGCTAAAGATTACATTCCAGGAGCAGAA
GTTCTGGAAGTTGAGAAAGAAGAGAATGCTGAAAATGATGAAGATGGATGGGAAAGTACGAGTCTCAGTGAGGAGGAGGA
TGCTGATGGCGAATGGATTGATGTGCAACACTCTTCTGATGAAGAACGGCAAGAAATCTCCAAGAAGCTGAACAGCATGC
CCATGGAGGAGCGGAAAGCCAAAGCTGCAGCCATCAGCACCAGCCGAGTTTTAACTCAGGAAGACTTCCAGAAAATCCGC
ATGGCCCAAATGAGAAAAGAACTTGATGCTGCCCCTGGGAAATCCCAGAAGAGGAAATACATTGAAATAGACAGTGATGA
AGAGCCCAGGGGTGAATTACTTTCTCTTCGGGACATTGAACGCCTTCATAAAAAGCCAAAGTCTGACAAAGAGACAAGAC
TAGCAACTGCAATGGCTGGAAAGACAGACCGAAAAGAATTTATGAGGAAGAAAACCAAAACAAATCCATTTTCCAGTTCG
ACAAATAAAGAGAAGAAAAAACAGAAGAACTTTATGATGATGCGGTATAGCCAGAATGTCCGGTCAAAAAATAAGCGTTC
CTTCCGAGAAAAACAGTTGGCGCTACGAGATGCACTTTTGAAAAAGAGAAAAAGAATGAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .03 RPM
SRP007412_cerebellum 19 .82 RPM
SRP007412_heart 9 .03 RPM
SRP007412_kidney 16 .47 RPM
SRP007412_liver 17 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008524 ortholog_one2one 2 retrogenes
retro_cpor_510, retro_cpor_994,
Homo sapiens ENSG00000198301 ortholog_one2one 2 retrogenes
retro_hsap_2412, retro_hsap_4030,
Gorilla gorilla ENSGGOG00000006441 ortholog_one2one 1 retrogene
retro_ggor_1498,
Loxodonta africana ENSLAFG00000012217 possible_ortholog 1 retrogene
retro_lafr_980,
Macaca mulatta ENSMMUG00000017503 ortholog_one2one 1 retrogene
retro_mmul_604,
Nomascus leucogenys ENSNLEG00000027034 ortholog_one2many 1 retrogene
retro_nleu_2410,
Oryctolagus cuniculus ENSOCUG00000026953 ortholog_one2one 1 retrogene
retro_ocun_547,
Pan troglodytes ENSPTRG00000024399 ortholog_one2one 2 retrogenes
retro_ptro_1388, retro_ptro_2732,
Rattus norvegicus ENSRNOG00000022229 ortholog_one2one 2 retrogenes
retro_rnor_1381, retro_rnor_1967,
Tupaia belangeri ENSTBEG00000005270 ortholog_one2one 1 retrogene
retro_tbel_2414,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1777 89.78 59.53
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Download FASTA sequences of all ENSPPYG00000014852 retrocopies