Parental gene: | RPL10A, ENSPPYG00000016529 |
| Aliases: | None |
| Description: | ribosomal protein L10a [Source:HGNC Symbol;Acc:10299] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:35476729..35480909(+) |
>ENSPPYG00000016529
GAAGCTATGAGCAGCAAAGTCTCTCGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCATGGGAGCCAGCGCCGCCG
CAAGCTTAAGTCCACTCCCCGCCCTAAGTTCTCTGTGTGTGTCCTGGGGGACCAGCAGCACTGTGACGAGGCTAAGGCCG
TGGATATCCCCCACATGGACATCGAGGCGCTGAAAAAACTCAACAAGAATAAAAAACTGGTCAAGAAGCTGGCCAAGAAG
TATGATGCGTTTTTGGCCTCAGAGTCTCTGATCAAGCAGATTCCACGAATCCTCGGCCCAGGTCTAAATAAGGCAGGAAA
GTTCCCTTCCCTGCTCACACACAACGAAAACATGGTGGCCAAAGTGGATGAGGTGAAGTCCACAATCAAGTTCCAAATGA
AGAAGGTGTTATGTCTGGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGATGAGCTTGTGTATAACATTCACCTGGCT
GTCAACTTCTTGGTGTCATTGCTCAAGAAAAACTGGCAGAATGTCCGGGCCTTATATATCAAGAGCACCATGGGCAAGCC
CCAGCGTCTATATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 74 .53 RPM |
| SRP007412_cerebellum | 76 .12 RPM |
| SRP007412_heart | 94 .83 RPM |
| SRP007412_kidney | 196 .86 RPM |
| SRP007412_liver | 146 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000014090 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000005760 | ortholog_one2one | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000013766 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000037805 | possible_ortholog | 8 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000014574 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000002047 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001543 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_357 | 78.75 | 83.77 | Please wait, loading  |
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| 2. | retro_pabe_451 | 79.29 | 85.86 | Please wait, loading |
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| 3. | retro_pabe_475 | 81.12 | 73.82 | Please wait, loading |
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| 4. | retro_pabe_1208 | 78.71 | 80.10 | Please wait, loading |
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| 5. | retro_pabe_1597 | 68.07 | 84.82 | Please wait, loading |
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| 6. | retro_pabe_2614 | 82.42 | 85.86 | Please wait, loading |
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| 7. | retro_pabe_2759 | 92.73 | 85.86 | Please wait, loading |
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| 8. | retro_pabe_3302 | 85.37 | 85.34 | Please wait, loading |
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| 9. | retro_pabe_3315 | 83.73 | 85.86 | Please wait, loading |
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| 10. | retro_pabe_3377 | 96.34 | 85.86 | Please wait, loading |
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Download FASTA sequences of all ENSPPYG00000016529 retrocopies