RetrogeneDB ID: | retro_meug_541 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold134039:1090..1477(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL10A | ||
Ensembl ID: | ENSMEUG00000005760 | ||
Aliases: | None | ||
Description: | ribosomal protein L10a [Source:HGNC Symbol;Acc:10299] |
Percent Identity: | 82.17 % |
Parental protein coverage: | 60. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SKVSRDTLYEAVREVLHGTQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ |
SKVS..TLYEAV.EVLHG.Q.KRRKFLETVE.QISLKNYDP.KDKRFSGT.R.KST...KFSVCVLGDQQ | |
Retrocopy | SKVSCGTLYEAV*EVLHGIQCKRRKFLETVEPQISLKNYDPPKDKRFSGTFRIKSTSQSKFSVCVLGDQQ |
Parental | HCDEAKAVEIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKA |
...EAKAVEIPHMDIEALK..NKNKKLVKKLAKK.DAF.ASESLIKQI.R.LGP..NKA | |
Retrocopy | YGEEAKAVEIPHMDIEALKTVNKNKKLVKKLAKKCDAFSASESLIKQIFRTLGPSVNKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |